Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01686 ATGCCGGAGCTTCGTAGCGGAGTTCGCCGTGGACGTGGCCGCGGGCAGAAAACGTCGGAGACAGCGAGGAAGGAGGTGAAGGCTCGTGCGGCGCCGAGGGGGAGACCGAGGACTAGATTAGCGGCGAAGGAATTGGAGCGACAGGAGCCGTTGATCGCGATTCCGGAGCCTGCAAAGGAAGAGAAGAAGGACGAGGGTGTGGCCGTGAAAATGGTTGACGAAAGTGGTGGCTTGAGTGGCAATAAGGCTGAGGAAGATGCCATCACTCCACCTTTTCCAGATAAGGCATGTGATTGCGACTCTTGTTTTATTTTTCTGGTAGAGAGGAAACTGGGTAAAGGAGGATTCGGTCAGGTTTTTGTTGGCCGTCGTGAGCGTGCGACAGGTGCTGGGGCTGTGGAGGTGGCTTTGAAATTTGAACATACAAACAGTAAGGGCTGTAACTATGGCCCTCCTTATGAGTGGCAAGTATACAACACACTTGGGGGTAGTTATGGAATTCCCAAAGTACATTATAAAGGAAGACAAGGAGAATATTATATAATGGTTATGGACATACTTGGTCCAAGTTTGTGGGATGTCTGGAATTCCTCTAGCCAGATGATGTCTTCTGAAATGGTCTCGTGTATAGCGGTTGAGTCCTTATCAATACTTGAGAAGATGCACTCAAAAGGTTATGTACATGGAGATGTAAAACCAGAGAACTTTTTACTTGGTCAGCCAGCTACAGCACAAGAGAAGAAACTGTATCTCATTGACCTTGGATTAGCAACAAAATGGAGAGACACCTCCAGTGGACTGCATGTTGACTATGATCAACGCCCTGATATGTTTAGAGGGACTGTTCGATATGCTAGTGTCCATGCTCATTTGGGGAGAACTGCCAGTAGAAGGGATGATCTTGAATCTCTTGCATACACTCTCGTCTTCCTACATAAGGGTCGATTACCATGGCAAGGTTATCAGGGTGATAGCAAATCCTTCCTTGTTTGCAAAAAGAAGATGGGGACATCTCCTGAGACGCTGTGCTGCATGTGCCCTCCCCCTTTTAGGCAGTTTCTTGAGATTGTAGTGAATATGAAATTTGATGAAGAACCTAATTATTCCAAGCTCATATCTTTGTTTGATGGTATGATTGGACCCAATCCAGCATTGAGGCCTATTAATACTGAAGGTGCCCTAAAGGTTGGGCAAAAGCGGGGTAGATTGAATATTGAAGATGATGACTCACAGCCAAAAAAGAAGGTTCGTTTAGGGCTTCCTGCTACACAATGGATTTCAATTTACAATGCAAGAACACCAATGAAACAAAGGTATCATTACAACGTGTCTGATGCAAGGTTAGAACAGCATGTTGAGAAAGGGATTGCAGATGGCCTTCTCATTAGTTGTGTATCCTCTTGTGGCAATCTTTGGGCCCTTATTATGGATGCTGGAACTGGTTTTACTGCTCAAGTTTACAAGTTGTCAACGTTTTTCTTGCACAAGGAATGGATCATGGAGCAGTGGGATAACAGCTATTACATTACTTCTATTGCAGGGACCAGTAATGGCAGCTCTCTTGTGGTGATGTCAACAGGTACGCAGTATACTCAACAATCTTACAAAGTAAGCGAATCTTTCCCCTTCAAATGGATAAACAAGAAATGGAGAGAAGGTTTTCATGTCACGTCAATGGCTACTGCTGGAAGTCGCTGGGGTGTTGTTATGTCTCGGAATTCTGATTACCTTAAACAGTCGGTTGAACTTGATTTTCTCTATCCAAGTGAGGGTATCCATAAACGTTGGGATAAAGGTTATAGGATTACAGCAACTGCAGCTACATTGGATCAATGTGCTCTTATATTAAGCATTCCGAAGCGCAGGCCTAGTGATGAAACTCAGGAAACTCTACGTACAGCTCAATTTCCCAGCACGCATGTTAAGGATAAATGGTCAAAAAACCTCTACCTTTCCTGCTTGTGCTACGGGCGGACAGTATGCTGA 1986 0.4496 MPELRSGVRRGRGRGQKTSETARKEVKARAAPRGRPRTRLAAKELERQEPLIAIPEPAKEEKKDEGVAVKMVDESGGLSGNKAEEDAITPPFPDKACDCDSCFIFLVERKLGKGGFGQVFVGRRERATGAGAVEVALKFEHTNSKGCNYGPPYEWQVYNTLGGSYGIPKVHYKGRQGEYYIMVMDILGPSLWDVWNSSSQMMSSEMVSCIAVESLSILEKMHSKGYVHGDVKPENFLLGQPATAQEKKLYLIDLGLATKWRDTSSGLHVDYDQRPDMFRGTVRYASVHAHLGRTASRRDDLESLAYTLVFLHKGRLPWQGYQGDSKSFLVCKKKMGTSPETLCCMCPPPFRQFLEIVVNMKFDEEPNYSKLISLFDGMIGPNPALRPINTEGALKVGQKRGRLNIEDDDSQPKKKVRLGLPATQWISIYNARTPMKQRYHYNVSDARLEQHVEKGIADGLLISCVSSCGNLWALIMDAGTGFTAQVYKLSTFFLHKEWIMEQWDNSYYITSIAGTSNGSSLVVMSTGTQYTQQSYKVSESFPFKWINKKWREGFHVTSMATAGSRWGVVMSRNSDYLKQSVELDFLYPSEGIHKRWDKGYRITATAATLDQCALILSIPKRRPSDETQETLRTAQFPSTHVKDKWSKNLYLSCLCYGRTVC 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01686 661 Gene3D Transferase(Phosphotransferase) domain 1 97 413 - -
Spst10g01686 661 ProSitePatterns Protein kinases ATP-binding region signature. 111 138 IPR017441 GO:0005524
Spst10g01686 661 Pfam Protein kinase domain 107 387 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01686 661 SUPERFAMILY Protein kinase-like (PK-like) 105 383 IPR011009 -
Spst10g01686 661 ProSiteProfiles Protein kinase domain profile. 105 385 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01686 661 MobiDBLite consensus disorder prediction 1 65 - -
Spst10g01686 661 CDD STKc_CK1 105 375 - -
Spst10g01686 661 ProSitePatterns Serine/Threonine protein kinases active-site signature. 226 238 IPR008271 GO:0004672|GO:0006468
Spst10g01686 661 PANTHER CASEIN KINASE-RELATED 101 631 - -
Spst10g01686 661 SMART serkin_6 105 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01686 Spst-Chr10 17287288 17292130 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01686 65 333 AGC Kinase Gene Family AT3G08720 21.771 5.03e-08 53.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CK1_CK1-Pl Spst10g01686 Pkinase 1.3e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01686 - - gmx:100783819 1214.13