Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01664 ATGTCATTTCGAGCTGGCACTGGCACTGCAAGTCTGCGGTGGTTGCTGCACAGCGTTTTCAACGCTCATTGTCTTCACCTTAGCTTCTATTCTTTGGCTCTGTCAAAACCGCAGTTTTCTGCCAATTGCCACGATATTTTGCCATGGTTGGAGCTGAAAGCTGCTTCTACAATTTCCTCCTCGCTTTCCATCGGGAAATCTTCGTATGGACGGTCTCTGTTTGCTTCTAAGTCAATACAAACTGGAGATTGCATTTTAAAGGTTCCTTACAGAGTGCAAATAACTGCTGATAATCTCCCTCCTGAAATCAGATATTTGATTGGTGAGGAAGTTGGAAATATTGCGAAACTTGCTATTGTTATTCTCATTGAGAAGAAATTGGGTCAGGGCTCTGAATGGTATCCTTATATCAGCTGTCTTCCACAGCAAGGGGAGCTGCATAATACGTTATTTTGGAATGAAAGTGAGTTGGAGATGATTCGTCCAAGTTCAGTTTATCAGGAAACTATTGACCATAAGTCTCAAATTGAAAAAGACTTTTTGGCTGTCAAGCGAGTTTTTGAATGTTGCCATCTAAGTTTTGGAGATTTTACTTTCAAGGACTTCATGCATGCATGCACACAAGTTGGTTCTCGAGCATGGGGAAGCACAAAGGGTTTAGCTCTGATTCCATTTGCAGATTTCTTAAACCATGATGGAGTTTCAGAAGCAATTGTAATGAGTGATGATGACAAACAATGTTCAGAAATTATTGCTGATCGGGACTATGCCCCTGGTGAACAGGTCCTAATAAGATATGGAAAGTTTTCAAATGCTACACTAATGCTGGACTTTGGTTTTACAATTCCACACAACATTTACGATCAGGTTCAAATCCAGTTTGATATAGCTAAGCATGATCCTTTGCATGACATGAAGTTGGAACTCTGGCATCGATATGCTGTACTTCCACCTGAAGATATGAAGGACTTAACATATCCTGTGAATACCTTCGTTATCAAAATGATTTTGCTTTGTGTGTCCAAATTGCCCTTGTTGCTCTTGAATGCATTGCTTACTTTTAGCAAAGCAAAGGAGGTGAAATCGGATAGAGGAAAAGGGAAAGGTCTTCCACAGTCAATTCGTGCGCTCGCTCGTGTTCTTTCTTGTACCACATCTCAGGAACTTGACGATTTGGTCATGGAAGCTGCTCAAAATGATGGCAGGCTGGCTAGGCGCCCTTTAAAGGATATCAGAAAAGAGATCAAAGCACACATGATGTTGTTATCGGTATTCATCCAATTAATTGAGGAGCGCAATGCGACTATCATGTCACTGGATTCTTCGTATTCCTCTTCCTTGTGTGAAAGGCTTTCTGTTAGAAGACTAATGGCTCAAGATCTCCTACAAGCCATTGGAGTATCGGAGAAGTATCACGATATCAGAATATTGACAATACTGCATGCAACATTTGAAAATATCATATCAACTGGGAAAATCAAAGATGGAAACAATGATATGCAGATCAATTCATGCCTCTCTCTTGCTTCTTGTGATACTGTGTTTGATGAAAGCAGTGAAGGAGATCATCAGAAGATCTATTGGCTGGTGAAAGTGGATGGTGTGTATCACAGTTGGGACAACAACACCTGGCAGAAACGCAAATCTTGGCAATTTACAGTTTTTGGAGCCACCGGTTCCTCTAACCCTGTTGAACGCGACTCAAGATTTGGTGTGAAAATCAACATACTGGTGATTTCCATCGTGAATGATTTGCGCTCAGGTTCACCAACACCGTCTTTCAGCAGCGATTACCAACCAAATGAGGTGGAATTGAAACCAGGAAGCCCTTTCGTTAAACTAATGAATTTCGATTCGCACAGTGGAATGGTGAAATGGGCGATGTGTAAACTTCCGGTGATTCTGTATTCATCTTCCATTGATGGTGACCACCAACGCATCTATTGGTCTGTCAGAGAAGATGGTGTTTATCACAGTTGGGATAATACAAACTGGAAGAGTTCAGCTTCTGCAAATTCTCTTGCAGCCACTCACACTGATCAAAATGACTCAAACGTTTCTGTTGACATAAACGTTGTGGGCATTATCATTTCCAATGACTTGCCTCCAAGCCCAAACAAGTTGTTGTTGTTCACGGATTTTCAGAAGAATCAGGTGGAGATTCGTCGTGGAGATCCCTACACAAGATTGCTGAGCATGGATGATCACACTGGTCAATTGAGATGGAAGCAGTGTCTGGATTTCAGTTATATTCCTGGTTTAGAGAAAGGACATCAACGTGTTTTTTGTTCAGTGTGTGGGGAGTGTCTGGAATCCAGAAGCGTGGATTCTGGTGGTCTGCAAAAGGAGACAAATATTTCTGCAGACAACATAAACATAGTGTTCGTATCGGTTTCGAATGATTTGCCTCGAAGCCCAAAGAAGTTGTTCTTCTTTGCGGATTTCCAGAAGGATCAAGTGGAGATTCGGCAGGGAAATCCTTACACAAGCTTGGTGAGCATGGATGATGACACTGGTGAATTGAAATGGAACAAGTGCTCCGATTTCAGCGTCTATATTCCTGGTTTGGAGAAAGGACATAACACTGTTTATTGGTCTGCAAGAGAAGATGGTATATATCATAGTTGGGATTCTAAGACATGGGAGAGAAAGGAAGTTTGGAGTTATTTTTGTTAA 2676 0.4155 MSFRAGTGTASLRWLLHSVFNAHCLHLSFYSLALSKPQFSANCHDILPWLELKAASTISSSLSIGKSSYGRSLFASKSIQTGDCILKVPYRVQITADNLPPEIRYLIGEEVGNIAKLAIVILIEKKLGQGSEWYPYISCLPQQGELHNTLFWNESELEMIRPSSVYQETIDHKSQIEKDFLAVKRVFECCHLSFGDFTFKDFMHACTQVGSRAWGSTKGLALIPFADFLNHDGVSEAIVMSDDDKQCSEIIADRDYAPGEQVLIRYGKFSNATLMLDFGFTIPHNIYDQVQIQFDIAKHDPLHDMKLELWHRYAVLPPEDMKDLTYPVNTFVIKMILLCVSKLPLLLLNALLTFSKAKEVKSDRGKGKGLPQSIRALARVLSCTTSQELDDLVMEAAQNDGRLARRPLKDIRKEIKAHMMLLSVFIQLIEERNATIMSLDSSYSSSLCERLSVRRLMAQDLLQAIGVSEKYHDIRILTILHATFENIISTGKIKDGNNDMQINSCLSLASCDTVFDESSEGDHQKIYWLVKVDGVYHSWDNNTWQKRKSWQFTVFGATGSSNPVERDSRFGVKINILVISIVNDLRSGSPTPSFSSDYQPNEVELKPGSPFVKLMNFDSHSGMVKWAMCKLPVILYSSSIDGDHQRIYWSVREDGVYHSWDNTNWKSSASANSLAATHTDQNDSNVSVDINVVGIIISNDLPPSPNKLLLFTDFQKNQVEIRRGDPYTRLLSMDDHTGQLRWKQCLDFSYIPGLEKGHQRVFCSVCGECLESRSVDSGGLQKETNISADNINIVFVSVSNDLPRSPKKLFFFADFQKDQVEIRQGNPYTSLVSMDDDTGELKWNKCSDFSVYIPGLEKGHNTVYWSAREDGIYHSWDSKTWERKEVWSYFC 891
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01664 891 SUPERFAMILY SET domain 45 285 IPR046341 -
Spst10g01664 891 Pfam SET domain 70 267 IPR001214 GO:0005515
Spst10g01664 891 Gene3D set domain protein methyltransferase, domain 1 39 280 - -
Spst10g01664 891 Gene3D - 282 465 IPR036464 -
Spst10g01664 891 CDD SET_RBCMT 69 281 IPR044431 GO:0016279|GO:0018022
Spst10g01664 891 ProSiteProfiles SET domain profile. 60 267 IPR001214 GO:0005515
Spst10g01664 891 PANTHER LEGUMINOSIN GROUP486 SECRETED PEPTIDE 786 888 - -
Spst10g01664 891 FunFam Ribulose-1,5 bisphosphate carboxylase/oxygenase large subunit N-methyltransferase, chloroplastic 39 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01664 Spst-Chr10 17103607 17120271 Tandem
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR SET Spst10g01664 SET 9.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01664 K19199 - gmx:100818002 694.115
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01664 10 17103607 17120271 Spst10g01664 10 17103607 17120271 ECH