Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01650 ATGATCTCAAACTCCGACCCTGTAGAGCCAGTCACGGCGGCCGCGGCCACCGGCGCCGTCGTTGCAACTGCTTCTTCTTCCCCTGAAGATCAGCTTGCACCACCGGCGACACCAAACATTGTGATGTCCTCCAAGGATCACGATTCTCTCTTCAGCGGTGGCGGCATCAGTCGTAATGGAAGGTTCAGCTATGGATATTCCAGTTTCAAGGGTAAGAGGTCATCGATGGAGGATTTCTTTGAGACCAGAATATCAGAGGTTGATGGTCAGATGGTTGCCTTTTTTGGTGTATTTGATGGTCATGGAGGTTCCCGGACTGCAGAATATTTGAAAAATAATCTTTTTAACAATTTGAGTAGCCATCCTGAATTTATCAGAGACACAAAGACTGCTATAGTGGAAGCGTTTAAACAGACAGATGTTGACTACCTCAATGAGGAAAAGGGGCATCAAAGAGATGCTGGGTCCACTGCATCAACAGCAATGTTGTTGGGGGACCGAATTGTTGTTGCAAATGTTGGTGATTCCAGAGTCGTCGCAAGCAGAGCTGGTTCAGCTATTCCTTTGTCCATCGATCACAAACCTGATAGATCTGATGAACGTCAAAGGATTGAAAAGGCTGGGGGATTCATAATTTGGGCTGGAACATGGAGGGTTGGTGGTGTTCTTGCTGTTTCCCGTGCATTTGGAGACAAACTTCTTAAGCCTTACGTTGTTGCTGACCCAGAAATTCAGGAGGAAGAAATTGACGGTGTGGATTTTATTATAATTGCTAGTGATGGCCTTTGGAATGTCATATCAAACAAGGAGGCCGTGTCTTTAGTACAAAATATCACAGATGCAGAGGTGGCATCCAGAGAACTTATAAAAGAAGCTTATGCACGAGGAAGCTCAGATAACATCACTTGTGTTGTTGTTCGATTTGATCTATCCTGA 936 0.453 MISNSDPVEPVTAAAATGAVVATASSSPEDQLAPPATPNIVMSSKDHDSLFSGGGISRNGRFSYGYSSFKGKRSSMEDFFETRISEVDGQMVAFFGVFDGHGGSRTAEYLKNNLFNNLSSHPEFIRDTKTAIVEAFKQTDVDYLNEEKGHQRDAGSTASTAMLLGDRIVVANVGDSRVVASRAGSAIPLSIDHKPDRSDERQRIEKAGGFIIWAGTWRVGGVLAVSRAFGDKLLKPYVVADPEIQEEEIDGVDFIIIASDGLWNVISNKEAVSLVQNITDAEVASRELIKEAYARGSSDNITCVVVRFDLS 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01650 311 SMART PP2C_4 53 306 IPR001932 -
Spst10g01650 311 FunFam probable protein phosphatase 2C 59 55 311 - -
Spst10g01650 311 ProSitePatterns PPM-type phosphatase domain signature. 94 102 IPR000222 GO:0043169
Spst10g01650 311 CDD PP2Cc 62 308 IPR001932 -
Spst10g01650 311 Gene3D - 56 310 IPR036457 -
Spst10g01650 311 PANTHER PROTEIN PHOSPHATASE 44 308 IPR015655 GO:0004722|GO:0006470
Spst10g01650 311 Pfam Protein phosphatase 2C 64 301 IPR001932 -
Spst10g01650 311 SUPERFAMILY PP2C-like 56 309 IPR036457 -
Spst10g01650 311 ProSiteProfiles PPM-type phosphatase domain profile. 63 308 IPR001932 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01650 Spst-Chr10 16975586 16982026 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01650 40 311 PP2C-type Phosphatase Gene Family AT1G43900 72.924 1.04e-152 431
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01650 K17506 - gmx:100776867 558.525