Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01633 ATGGATGATTTAGTGATTCAGCCCATGTCAACCTTATCAAGCACTACATTACTGAACAAATTCAACGTCTTGCAAAAAAAGGTAGTCGAGTTGGGGATGACTCAGGGTGTGAATCTTCTGAAAGCTTCTCTACAGTCGAAGACGATTTTGACCGATAATAAAGCATCGAGTCAGAAGGTCCTTTTCGCAGAAGCATCAAAGCCTGTGGTAGATTTTCTCTTTAACTTGCTTTGCTTGCCTCTCAGTGCTGTTATTAGGCTTCTCAACCAGAATCACATGGTTGGTTGCTTAGGCTACGTCTATCAAAGTGTTGAAAATTTGGATGAAACTTACATACAACCAAACCAGCATAAGGATCTTCTCTTGAAGTCAAGAACCCCATCTCTTCGCAACAAATCTCGGATCTTCTTCCTGCAAATGATCACAGTTCTAGCGGAAACACGAGCACTGCATTATTCTACAGAAGATGCATTCCCTCATAAAAATGGGTTTGTGAAAGAGGTTGTAACTTACATGGTGATGGATGATTTAGTGATTGAACCCATGCCAACCATATCAATCATTACATTACTCAAGTTGAATTTTAAAGAAGTTGGTGACCTGAAAGAAAAAGTTGTTTACTTGGAGATGGCTCAGTCAAACCACGCGCCGCCACCTCACAAGTCACAACCACCTCGACGGCGTTCAATACGTCGTCGTTTCTTCAACAGAAGAGAGAAAGGAGCTCACGCTCTGAATTCGCGTGCGATCTGTTTTCCAATTCTTCGTCAAGGAGAGTTAGTTGGTGGTGTTGCTGTCATAGATATGATGGTTTCTCGGGGGCTGTTCGGATGGTCCCCGCCGCACATACAGCCTCTCACGCCGGTATCCGAGGTGTCGGAGCCGCCGGAGTCGCCGTCGCCGTACCTCGACCTCGGCGCCGAAACCTCCGCGTCGCAGCCGATGGAAGTCGAGGAGGAGATGGAGGAGGCTGAGGAAATTGAGCCGCCGCCCGCCGCCGTTCCTTTCTCCCGCCTCTTCGCCTGCGCCGACCGCCTCGACTGGTTTCTCATGCTTGTCGGCTCCCTCGCCGCCGCCGCGCACGGTACCGCTCTCGTCGTTTACTTGCACTACTTCGCCAAGGTTCTATGGGTTCCTCAGCAGGGTTTGCCGGAAGAGCAGTTTCAGAGGTTCAAGGAGTTTTTGAAGTTTTTTATGGCCTTGGTTGCCGTGTTGTTTGAGCTTGCTTTAACCATTGTTTATATTGCTGGTGGAGTTTTTGCTGCTGGTTGGATTGAGGTTTCATGTTGGATTCTAACTGGAGAACGGCAGACTGCTGTGATCAGATCAAATTATGTCCAAGTATTACTTAACCAAGATATGAGTTTTTTTGATACGTACGGAAATAATGGAGACATTGTGAGTCAAGTATTAAGTGATGTGCTGCTCATTCAGTCTGCCCTTAGTGAAAAGGTTGGGAATTATATTCATAATATGGCAACATTCTTCAGTGGTCTTGTTATTGCTTTTATCAATTGTTGGCAGATTGCATTGATAACATTAGCTACAGGCCCATTTATTGTTGCTGCAGGAGGAATATCGAATATATTCCTCCACAGGCTTGCCGAGAATATTCAAGATGCATATGCTGAAGCAGCCAGCATTGCTGAACAGGCAGTTTCCTATATAAGGACCTTGTATGCATTTACAAATGAAACATTGGCCAAATATTCATATGCAACATCACTTCAAGCTACTCTTAGATATGGTATATTAATAAGTCTTGTTCAAGGGCTTGGCCTTGGTTTTACTTATGGGCTTGCAATATGTTCCTGTGCATTACAACTCTGGGTTGGAAGGCTCCTGGTCATACACGAAAAAGCTCATGGTGGTGAAATTATAACAGCACTGTTTGCTGTGATTCTTAGTGGCTTGGGATTGAATCAAGCAGCAACAAATTTCTACTCATTTGATCAAGGGCGAATAGCTGCTTATAGACTATTTGAGATGATTAGCCGGTCATCCTCATCCATTAATCATGATGGAAGTGCTCCAGCTTCTGTGCAAGGAAATATAGAGTTTCGGAATGTCTACTTCAGTTATCTTTCTCGTCCTGAAATCCCTATCTTGAGTGGGTTTTATCTCACTGTTCCTGCTAAAAAAACTGTGGCGCTAGTTGGAAGAAATGGCTCTGGAAAAAGTAGTATTATTCCCCTTATGGAGCGATTCTATGATCCAACTTTAGGGGAAGTTCTTTTAGATGGTGAAAATATAAAGAATATGAAACTGGAATGGTTAAGGAGCCAGATAGGACTGGTGACCCAGGAACCTGCGTTACTCAGTTTGAGTATAAGAGATAACATTGCTTATGGGAGAGATACCACCATGGATCAAATTGAAGAGGCTGCTAAAATAGCTCATGCACATACCTTTATCAGCTCACTAGATAAAGGTTATGACACACAGGTTGGCAGGGCTGGTCTAGCTTTAACAGAAGAGCAGAAAATAAAACTTTCAATTGCAAGAGCTGTGCTTTTAAATCCATCCATTCTTCTGCTTGATGAGGTTACTGGTGGACTTGATTTTGAGGCTGAGAGGTCTGTTCAGGAGGCTCTGGATCTGCTAATGTTGGGACGCTCAACAATAATAATTGCTCGAAGACTTAGTCTTATCAAGAATGCTGATTATATAGCTGTTATGGAGGATGGTCAACTTGTTGAAATGGGTACTCATGATGAGTTACTGACCCTGGACGGCTTATATGCAGAGCTTCTTCGATGTGAAGAGGCCACAAAACTTCCTAAGAGGATGCCTGTTCGAAACTACAAGGAGACTGCAACTTTCCAAATTGAGAAAGATTCTTCAGAAAGTCATAGCTTCAAAGAACCTTCATCTCCTAAAATGATAAAATCACCCTCTCTTCAAAGAGTTTCTGCAATATTTCGACCTTCGGATGGCTTTTTTAATTCACAAGAATCACCAAAAATTCGGAGCCCACAGTCCGAGAAGATGATGGAAAATGGCCAGTCTTTAGATTCAGCAGATAAGGAGCCATCAATAAAGAGGCAGGATAGTTTTGAAATGAGACTACCAGAGTTACCCAAGATTGATGTTCAATGTGTGCATCGACAAACATCGAATGGTTCTGATCCAGAATCCCCTGTTTCACCTCTTTTGACATCTGATCCTAAAAATGAACGCTCCCATTCACAGACTTTTAGCAGACCTGATAGTCATTCTGATGATCTTTCGGTGAAAATGAGTGAAACAAAGGATACCAGGCATCGAAAACAACCCTCAATATGGAGGCTAGCAGAACTTAGCTTTGCTGAGTGGCTTTATGCCGTGTTAGGAAGTACAGGTGCTGCTATATTTGGTTCTTTCAATCCCCTTCTTGCTTATGTTATTGGTCTGGTGGTGACAGATTACTATAAAATTGATAAATCTCATCACTTACGAAGGGAGATAGACAAATGGTGTCTGATCATTGCCTGCATGGGTATCGTGACAGTTGTTGCCAACTTTTTACAGCATTTCTACTTTGGTATTATGGGAGAGAAAATGACAGAAAGGGTTAGGAGAATGATGTTCTCAGCCATGCTACGCAATGAAACTGGATGGTTTGATGAAGAGGAAAATAGTGCTGACAATCTATCCATGCGCTTGGCCAATGATGCTACATTTGTGCGAGCGGCTTTCAGTAACCGTCTTTCCATATTTATACAGGACAGTGCTGCAGTTATTGTTGCTTTTCTCATTGGTGTCTTACTGCACTGGAGATTAGCCCTAGTGGCTTTAGCAACACTTCCAGTTCTTTGTGTTTCTGCCGTTGCCCAGAAAATGTGGCTGGCTGGATTTTCAAAAGGCATACAAGAAATGCACAGAAAGGCATCTTTGGTTCTTGAAGATGCAGTTAGGAATATTTACACTGTTGTTTCATTTTGTGCTGGTAATAAGGTGATGGAACTCTACCAGTTACAGTTAAATAAAATATTTAAGCAAAGCTTTCTTCATGGAGTGGCCATTGGTTTTGCATTTGGCTTTTCACAGTTTCTGCTCTTTGCTTGTAATGCCCTTCTACTTTGGTACACTGCAATATGTGTAAATAAGGGATATGTGGATCCACCTACTGCTCTCAAGGAATACATGGTTTTCTCATTTGCCACATTTGCCCTTGTGGAGCCTTTTGGGTTGGCTCCTTACATACTTAAGCGACGGAAATCTCTCATGTCAGTCTTTGAAATTATAGATCGTGTACCTAAGATTGATCCTGATGATACCAAATCAATGAAGCCACCCAATGTATATGGGAGCATTGAGTTGAAAAATGTTGATTTTTGTTATCCTTCTAGACCAGAAGTGTTGGTACTAAGCAATTTTAGTCTGAAAGTCAATGGAGGACAAACAATTGCTGTAGTGGGAGTTTCGGGGTCAGGGAAAAGCACAATAATATCTTTGATAGAGAGATTCTACGATCCGGTTTCTGGCCAAGTTTTGCTAGATGGGAGGGATTTAAAACAATATAATCTGAGATGGTTGAGGAGCCACCTAGGACTGGTTCAGCAGGAACCAATTATCTTCTCAACAACCATAAGGGAAAACATCATATATGCCAGACATAATGCCAGTGAAGCTGAAATTAAGGAGGCAGCAAGAATAGCAAATGCTCATCACTTCATTAGTAGCTTGCCTCATGGTTATGACACTCATGTTGGGATGAGAGGTGTTGACTTAACTCCAGGACAAAAACAGAGAATTGCAATTGCAAGGGTAATTCTTAAAAATGCTCCTATTTTGTTGTTGGATGAAGCTAGTTCATCGATTGAATCTGAGTCAAGCCGAGTGGTGCAAGAGGCACTAGACACCCTAATAATGGGAAACAAGACTACTATTTTAATAGCACACAGAGTTGCAATGATGAGGCACGTGGACAACATAGTAGTTCTAAATGGAGGAAGGATAGTGGAGGAGGGGACCCATGATTCATTGGTGGCAAAAAATGGTCTGTATGTACGATTGATGCAACCTCATTTTGGCAAGGCTCTGCGTCAGCATCGGCTTGTTTAG 5046 0.4251 MDDLVIQPMSTLSSTTLLNKFNVLQKKVVELGMTQGVNLLKASLQSKTILTDNKASSQKVLFAEASKPVVDFLFNLLCLPLSAVIRLLNQNHMVGCLGYVYQSVENLDETYIQPNQHKDLLLKSRTPSLRNKSRIFFLQMITVLAETRALHYSTEDAFPHKNGFVKEVVTYMVMDDLVIEPMPTISIITLLKLNFKEVGDLKEKVVYLEMAQSNHAPPPHKSQPPRRRSIRRRFFNRREKGAHALNSRAICFPILRQGELVGGVAVIDMMVSRGLFGWSPPHIQPLTPVSEVSEPPESPSPYLDLGAETSASQPMEVEEEMEEAEEIEPPPAAVPFSRLFACADRLDWFLMLVGSLAAAAHGTALVVYLHYFAKVLWVPQQGLPEEQFQRFKEFLKFFMALVAVLFELALTIVYIAGGVFAAGWIEVSCWILTGERQTAVIRSNYVQVLLNQDMSFFDTYGNNGDIVSQVLSDVLLIQSALSEKVGNYIHNMATFFSGLVIAFINCWQIALITLATGPFIVAAGGISNIFLHRLAENIQDAYAEAASIAEQAVSYIRTLYAFTNETLAKYSYATSLQATLRYGILISLVQGLGLGFTYGLAICSCALQLWVGRLLVIHEKAHGGEIITALFAVILSGLGLNQAATNFYSFDQGRIAAYRLFEMISRSSSSINHDGSAPASVQGNIEFRNVYFSYLSRPEIPILSGFYLTVPAKKTVALVGRNGSGKSSIIPLMERFYDPTLGEVLLDGENIKNMKLEWLRSQIGLVTQEPALLSLSIRDNIAYGRDTTMDQIEEAAKIAHAHTFISSLDKGYDTQVGRAGLALTEEQKIKLSIARAVLLNPSILLLDEVTGGLDFEAERSVQEALDLLMLGRSTIIIARRLSLIKNADYIAVMEDGQLVEMGTHDELLTLDGLYAELLRCEEATKLPKRMPVRNYKETATFQIEKDSSESHSFKEPSSPKMIKSPSLQRVSAIFRPSDGFFNSQESPKIRSPQSEKMMENGQSLDSADKEPSIKRQDSFEMRLPELPKIDVQCVHRQTSNGSDPESPVSPLLTSDPKNERSHSQTFSRPDSHSDDLSVKMSETKDTRHRKQPSIWRLAELSFAEWLYAVLGSTGAAIFGSFNPLLAYVIGLVVTDYYKIDKSHHLRREIDKWCLIIACMGIVTVVANFLQHFYFGIMGEKMTERVRRMMFSAMLRNETGWFDEEENSADNLSMRLANDATFVRAAFSNRLSIFIQDSAAVIVAFLIGVLLHWRLALVALATLPVLCVSAVAQKMWLAGFSKGIQEMHRKASLVLEDAVRNIYTVVSFCAGNKVMELYQLQLNKIFKQSFLHGVAIGFAFGFSQFLLFACNALLLWYTAICVNKGYVDPPTALKEYMVFSFATFALVEPFGLAPYILKRRKSLMSVFEIIDRVPKIDPDDTKSMKPPNVYGSIELKNVDFCYPSRPEVLVLSNFSLKVNGGQTIAVVGVSGSGKSTIISLIERFYDPVSGQVLLDGRDLKQYNLRWLRSHLGLVQQEPIIFSTTIRENIIYARHNASEAEIKEAARIANAHHFISSLPHGYDTHVGMRGVDLTPGQKQRIAIARVILKNAPILLLDEASSSIESESSRVVQEALDTLIMGNKTTILIAHRVAMMRHVDNIVVLNGGRIVEEGTHDSLVAKNGLYVRLMQPHFGKALRQHRLV 1681
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01633 1681 Gene3D ABC transporter type 1, transmembrane domain 1078 1420 IPR036640 GO:0005524|GO:0016020
Spst10g01633 1681 SMART AAA_5 1459 1646 IPR003593 GO:0016887
Spst10g01633 1681 SMART AAA_5 712 891 IPR003593 GO:0016887
Spst10g01633 1681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 676 919 IPR027417 -
Spst10g01633 1681 Pfam Protein of unknown function (DUF674) 159 209 IPR007750 -
Spst10g01633 1681 Pfam Protein of unknown function (DUF674) 57 128 IPR007750 -
Spst10g01633 1681 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 408 652 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst10g01633 1681 FunFam ABC transporter B family member 20 338 688 - -
Spst10g01633 1681 MobiDBLite consensus disorder prediction 941 1012 - -
Spst10g01633 1681 Gene3D - 675 922 IPR027417 -
Spst10g01633 1681 PANTHER ABC TRANSPORTER B FAMILY 316 921 IPR039421 -
Spst10g01633 1681 Coils Coil 531 551 - -
Spst10g01633 1681 MobiDBLite consensus disorder prediction 1037 1060 - -
Spst10g01633 1681 MobiDBLite consensus disorder prediction 977 1007 - -
Spst10g01633 1681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 685 920 IPR003439 GO:0005524
Spst10g01633 1681 SUPERFAMILY ABC transporter transmembrane region 1096 1417 IPR036640 GO:0005524|GO:0016020
Spst10g01633 1681 Gene3D ABC transporter type 1, transmembrane domain 338 936 IPR036640 GO:0005524|GO:0016020
Spst10g01633 1681 Gene3D - 1422 1676 IPR027417 -
Spst10g01633 1681 ProSiteProfiles ABC transporter integral membrane type-1 fused domain profile. 1109 1401 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst10g01633 1681 FunFam ABC transporter B family member 6 1049 1277 - -
Spst10g01633 1681 Pfam ABC transporter 706 850 IPR003439 GO:0005524
Spst10g01633 1681 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1422 1668 IPR027417 -
Spst10g01633 1681 MobiDBLite consensus disorder prediction 288 311 - -
Spst10g01633 1681 CDD ABC_6TM_Pgp_ABCB1_D2_like 1104 1415 - -
Spst10g01633 1681 SUPERFAMILY ABC transporter transmembrane region 331 660 IPR036640 GO:0005524|GO:0016020
Spst10g01633 1681 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 1432 1669 IPR003439 GO:0005524
Spst10g01633 1681 FunFam ABC transporter B family member 6 1279 1429 - -
Spst10g01633 1681 MobiDBLite consensus disorder prediction 1061 1087 - -
Spst10g01633 1681 Pfam ABC transporter 1450 1598 IPR003439 GO:0005524
Spst10g01633 1681 FunFam ABC transporter B family member 20 1422 1671 - -
Spst10g01633 1681 CDD ABC_6TM_Pgp_ABCB1_D1_like 351 660 - -
Spst10g01633 1681 FunFam ABC transporter B family member 20 675 922 - -
Spst10g01633 1681 Pfam ABC transporter transmembrane region 1117 1377 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst10g01633 1681 Pfam ABC transporter transmembrane region 408 635 IPR011527 GO:0005524|GO:0016020|GO:0055085|GO:0140359
Spst10g01633 1681 MobiDBLite consensus disorder prediction 1037 1087 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01633 Spst-Chr10 16786546 16808746 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01633 314 978 Calmodulin-binding Proteins AT2G36910 43.155 4.11e-159 518
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01633 K05658 - gmx:100799399 2602.01