Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01631 ATGGCAGTCTATAGAATTGCAATTGGGTCCCCCAGAGAGGCCAGCAACCCTGCTGCCATCAGAGCAGCATTTGCTGAGTTCTTCTCCACGCTCATTTTTGTTTTTGCAGGGCAAGGCTCTGGCATGGCCTATAGCAAACTTACAGGTAATGGACCTGCAACACCTGAGGGTCTCTTAATTGCATCAGTGTCTCATGCATTTGGGCTTTTTGTGGCGGTTTCTGTGGGGGCAAATATTTCTGGTGGTCATGTGAACCCTGCAGTCACATTTGGTGCTTTCATACGAGGAAACATAACCCTCTTGAGAAGTATTTTGTATTGGATTGCACAGTTACTTGGTTCAGTTGTTGCTTGCATTCTTCTCAACTTTGCTTCTGGTGGAATGGAAACAACAGGTTTTTCTCTCTCATCTGGTGTCTCAGTGTGGAATGCAGTGGTTTTTGAGACTGTGATGACTTTTGGTTTGGTGTACACAGTTTATGCCACAGCAGTGGATCCAAAGAAAGGGAATGTGGGTGTTATTGCCCCACTAGCAATTGGGCTTATTGTAGGTGCCAACATCTTGGTTGGTGGGCCTTTTGATGGAGCATCAATGAACCCAGCTGTCTCATTTGGGCCAGCTCTTGTTAGCTGGTCATGGACCCATCACTGGGTTTACTGGTTTGGCCCATTCTTTGGTTCAGCTGCTGCTGCCATCCTCTATGATAACATCTTTATTGGTGATGATGGTCATGAAACCCTTATAAGTAGTGATTTCTAG 759 0.4585 MAVYRIAIGSPREASNPAAIRAAFAEFFSTLIFVFAGQGSGMAYSKLTGNGPATPEGLLIASVSHAFGLFVAVSVGANISGGHVNPAVTFGAFIRGNITLLRSILYWIAQLLGSVVACILLNFASGGMETTGFSLSSGVSVWNAVVFETVMTFGLVYTVYATAVDPKKGNVGVIAPLAIGLIVGANILVGGPFDGASMNPAVSFGPALVSWSWTHHWVYWFGPFFGSAAAAILYDNIFIGDDGHETLISSDF 252
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01631 252 Pfam Major intrinsic protein 15 234 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 Gene3D Glycerol uptake facilitator protein. 4 252 IPR023271 -
Spst10g01631 252 PRINTS Major intrinsic protein family signature 147 165 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PRINTS Major intrinsic protein family signature 65 89 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PRINTS Major intrinsic protein family signature 180 202 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PRINTS Major intrinsic protein family signature 21 40 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PRINTS Major intrinsic protein family signature 102 121 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PRINTS Major intrinsic protein family signature 217 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 ProSitePatterns MIP family signature. 83 91 IPR022357 -
Spst10g01631 252 CDD MIP 21 237 IPR000425 GO:0015267|GO:0016020|GO:0055085
Spst10g01631 252 PANTHER AQUAPORIN-8 6 241 IPR034294 -
Spst10g01631 252 FunFam Probable aquaporin TIP1-1 4 251 - -
Spst10g01631 252 SUPERFAMILY Aquaporin-like 16 240 IPR023271 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01631 Spst-Chr10 16781185 16782350 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01631 1 252 Major Intrinsic Protein MIP AT4G01470 80.556 6.54e-145 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01631 K09873 - gmx:100818197 451.825
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01631 10 16781185 16782350 Spst10g01631 10 16781185 16782350 ECH