Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01613 ATGGAAGAGATATCGGGTTCTGCAACAGCAATAAACTCTTCGAATATAGGATTTCAGCTACTGAAGAAGCAAGGTTGGAAAGAAGGGACTGGTCTTGGAGTATCCGAACAGGGTAGGTTAGAACCTGTGGAAACTTGTGTGAAGAATAATAAACGTGGTTTGGGAGCAGATAAAGTGAAGAAAAAGGCTGTGAAAGTAAAACCGGATCATAGCGACTCCTCTAAAGGGAGCAATCAACAGGATCATTTACCTCAAAAGAAAGCCAAAACATATTCTAAACGGACGAGAAAGATGCAGGAGCTTGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGCGCTTTTTTCAGAGAATTCTGGCCAGAGAATGTGTAA 372 0.414 MEEISGSATAINSSNIGFQLLKKQGWKEGTGLGVSEQGRLEPVETCVKNNKRGLGADKVKKKAVKVKPDHSDSSKGSNQQDHLPQKKAKTYSKRTRKMQELEKKMQEKEFERAFFREFWPENV 123
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01613 123 MobiDBLite consensus disorder prediction 50 100 - -
Spst10g01613 123 Coils Coil 91 111 - -
Spst10g01613 123 Pfam G-patch domain 14 56 IPR000467 GO:0003676
Spst10g01613 123 PANTHER BAT4 PROTEIN-RELATED 5 123 IPR039146 -
Spst10g01613 123 MobiDBLite consensus disorder prediction 51 76 - -
Spst10g01613 123 SMART G-patch_5 11 57 IPR000467 GO:0003676
Spst10g01613 123 ProSiteProfiles G-patch domain profile. 13 59 IPR000467 GO:0003676
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01613 11 55 C2H2 Transcription Factor Family AT5G26610 53.333 2.54e-10 54.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01613 - - gmx:100812494 191.815
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01613 10 16683414 16685429 Spst10g01613 10 16683414 16685429 ECH