Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01585 ATGTCTCAGACATCCAGCGTCCTGCCTGCCTTCCACTCCATCAAGTCATTGCCTCCTGAGTTTAAGTTTGCCAATAATCCAAACCCTCCGCTTGTGGAAAAACATGGAGATGTTAAATTTAGAAGGTCCAATCCGATTGGATCAAATGGTCTTGAGAATGGTGTACATGTAGGGGAGGTTTCTAAGGAAGTTCGAGCCCGAGCTGGTGGCATGGATCTTTTCGATGAGGATTCTCCATATGGTGGAAAAGGTAGATCATTAAAAGATCGACCATCTAATGCACATGAGGACTCAGTATCCGTTTCGTTGCCCCTGCCTTCAATTTTAATATCCTCTAGGGAAAACAGGTGGAATGATACAAATCTTTATGGTTCAAAAAAGAAAGTTCAGTCTTGGCTCCAATTACCAAATGGGGATTGGGAGCTGGTAAAGATAATAACAACTTCTGGAGCTGAATCTGTCATTTCACTGCCTGATGGGAAAGTTTTAAAGGTAAAAGAGGAGAATTTGGTGCCAGCTAATCCCGACATTCTTGATGGAGTGGATGACCTCATGCAACTTAGTTATTTAAATGAACCGGCAACGAAAGCTGGGCCTGTTTTGGTTGCCGTGAATCCCTTTAAGAAAGTTCCTTTGTATGGTAATGACTATATTGAAGCCTACAAGTGTAAAGCAATTGAAAGCCCGCATGTATATGCAATTACTGACACAGCCATCCGAGAAATGATACGAGATGAAGTGAATCAATCCATAATTATAAGTGGTGAGAGTGGAGCAGGAAAGACTGAGACAGCAAAAATAGCAATGCAATACTTGGCTGCCCTTGGTGGTGGAAGTGGAATAGAGAATGAGATATTGAAGACTAATCCAATACTAGAAGCCTTTGGCAATGGAAAAACATTAAGAAATGATAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGTGAAACGGGAAAAATATCTGTTTTGCTGGAAAAGTCCAGAGTAGTCCAATGCAACGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCATCATCTCTTAGGGAGAAGCTAAATCTACTAAGTGCGGAAGACTACAAATATCTGAGGCAGAGCAATTGTTATTCAATTACTGGTGTTGATGATGCAGAAGAATTTCGCATAGTCAAGGATGCTCTGGATATTGTCCACATTAGCAAAGGAGACCAGGAGAATGTATTTGCAATGCTTGCTGCAGTATTATGGTTAGGAAACATATCATTTACTGTGGTCGATAATGAAAATCATGTTCAAGCTATTGAGGATGAGGTTTACAAAGGGATACCTTCCTTTGTCACTACTTTTGGTGCAATGTGTCCTGAGATCACAGGTCTGTTCACTGTTGCCAAATTGATTGGCTGTGAAATTGAAGACCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATAATATTGTCCAGAAGTTGACGCTCTCTCAGGCTATTGACGCGAGAGATGCTTTGGCGAAGTCAATATATGCCTGTTTGTTTGATTGGTTGGTTGAGCAAATAAATAAATCTCTTGCGGTTGGCAAAAGACGAACTGGCAGATCAATCAGCATTCTTGACATTTATGGCTTTGAGTCATTCAATAGGAACAGTTTTGAGCAGTTTTGCATAAATTATGCAAATGAAAGATTACAGCAACATTTCAATCGTCATTTATTCAAGTTGGAACAGGAGGAATATATCCAAGATGGCATTGATTGGGCTAAAGTGGACTTTGAAGACAACCAAGATTGCCTTAATCTATTTGAAAAGAAACCACTGGGACTACTATCCCTCTTAGATGAAGAGTCAACTTTTCCTAACGGCACAGATTTAACGTTTGCAAACAAGCTTAAGCAGCATTTGATTTCCAATTCATGCTTCAAAGGAGAACGGGAAAAAGCCTTTACTGTGCGTCATTATGCAGGGGAGGTCACTTATGATACATCTGGATTCCTGGAAAAGAACAGGGACCTATTGCATTTAGATTCCATCCAACTTCTATCCTCAAGCAAATGCCATCTTCCCAAGTTATTTGCATCCCATATGCTCACTCAGTCTGAGAAGCCTGTAGTAGGTCCCTTACATAAGTCCGGTGGGGCAGATTCCCAAAAGCTAAGTGTTGCCACAAAATTCAAGGGACAATTGTTCCAACTGATGCAACGTCTAGAGAGTACTAGCCCACATTTTATACGCTGCATTAAGCCCAATAATCTCCAATCACCTGGATCATATGAGCAAAGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTTCTGGAAGTGGTTCGAATATCAAGATCAGGCTTTCCAACTAGAGTGTCTCACCAAAAGTTTGCCAGAAGATATGGTTTTCTTCTCCTTGAAAATGTTGCCTCTCAGGATCCACTTAGTGTCTCAGTTGCTATTCTTCATCAGTTCAACATTTTGCCTGAGATGTTTCAAGTTGGCTACACAAAACTATTCTTCCGAACAGGGCAGATTGGAGTGCTTGAGGATACAAGAAATCGTACCCTGCATGGAATTTTACGTGTGCAAAGTTGCTTCAGGGGTCACCGAGCTCGTTGTTACTGCAGGGAACTTTGGAGAGGAGTCACCACTCTCCAATCATTTATTAGAGGAGATAAAAGCAGAAAGGAATATGCAGCTTTGCTTCAGAGACATAGGGCTGCTGTTATTATACAGAAGCGGATGAAAACAGTACTTGCAAGAAACAGAATGACAAGTATTAACGATGCTGCGGTTGTCATACAGTCATTTATACGTGGTTGGTTAGTCAGAAAATGCTTAGGAAACATTGGATTATCAAAACCTGGAGTCACGAAGATTAATGAGTCGGATGAGGTTCTGGTGAAGTCGTCTTTCCTGGCTGAACTACAGCGCCGGGTACTTAAGGCAGAAGCTGCCCTAAGAGAGAAAGAAGAGGAAAATGACATTCTTCACCAACGCCTTCAACAGTATGAGAGCAGATGGTCTGAATATGAACTAAAGATGAAGTCCATGGAAGAAGTATGGCAGAAGCAAATGAGATCCCTACAATCTAGCCTCTCTATTGCAAAGAAGAGCCTCGCTATGGATGATTCTGGAAGAAATTCAGATGCTTCTGTTAACGCAAGTGATGAGAGGGATTTCGGCTGGGATGTAGGAACCACTCACCGGCGCCAAGAAAGCAATGGGGCAAGATCTATGAGTGCTGGTTTGAGTGTTATAAGTCGGCTGGCTGAAGAATTTGAGCAGAGAAGTCAAGTGTTTGGTGATGATGCTAAGTTCTTGGTAGAGGTAAAATCTGGTCAAGTTGAGGCAAGTTTGAACCCAGATAGAGAGCTCAGAAGGTTAAAACAGATGTTTGAAGCCTGGAAAAAGGATTATGGTGCAAGACTACGTGAAACAAAGGTCATCTTACATAAACTTGGAAGTGAAGATGGATCAATTGAGAAAGTGAAGAAAAGTTGGTGGGGAAGAAGGAATAGTACGAGAATAAGTTGA 3528 0.4141 MSQTSSVLPAFHSIKSLPPEFKFANNPNPPLVEKHGDVKFRRSNPIGSNGLENGVHVGEVSKEVRARAGGMDLFDEDSPYGGKGRSLKDRPSNAHEDSVSVSLPLPSILISSRENRWNDTNLYGSKKKVQSWLQLPNGDWELVKIITTSGAESVISLPDGKVLKVKEENLVPANPDILDGVDDLMQLSYLNEPATKAGPVLVAVNPFKKVPLYGNDYIEAYKCKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIENEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISVLLEKSRVVQCNEGERSYHIFYQLCAGAPSSLREKLNLLSAEDYKYLRQSNCYSITGVDDAEEFRIVKDALDIVHISKGDQENVFAMLAAVLWLGNISFTVVDNENHVQAIEDEVYKGIPSFVTTFGAMCPEITGLFTVAKLIGCEIEDLKLTLSTRKMKVGNDNIVQKLTLSQAIDARDALAKSIYACLFDWLVEQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWAKVDFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLISNSCFKGEREKAFTVRHYAGEVTYDTSGFLEKNRDLLHLDSIQLLSSSKCHLPKLFASHMLTQSEKPVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLESTSPHFIRCIKPNNLQSPGSYEQSLVLQQLRCCGVLEVVRISRSGFPTRVSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMFQVGYTKLFFRTGQIGVLEDTRNRTLHGILRVQSCFRGHRARCYCRELWRGVTTLQSFIRGDKSRKEYAALLQRHRAAVIIQKRMKTVLARNRMTSINDAAVVIQSFIRGWLVRKCLGNIGLSKPGVTKINESDEVLVKSSFLAELQRRVLKAEAALREKEEENDILHQRLQQYESRWSEYELKMKSMEEVWQKQMRSLQSSLSIAKKSLAMDDSGRNSDASVNASDERDFGWDVGTTHRRQESNGARSMSAGLSVISRLAEEFEQRSQVFGDDAKFLVEVKSGQVEASLNPDRELRRLKQMFEAWKKDYGARLRETKVILHKLGSEDGSIEKVKKSWWGRRNSTRIS 1175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01585 1175 PRINTS Myosin heavy chain signature 194 213 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 PRINTS Myosin heavy chain signature 290 317 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 PRINTS Myosin heavy chain signature 589 617 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 PRINTS Myosin heavy chain signature 248 273 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 PRINTS Myosin heavy chain signature 536 564 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 PANTHER MYOSIN 172 1167 - -
Spst10g01585 1175 MobiDBLite consensus disorder prediction 72 95 - -
Spst10g01585 1175 Gene3D Kinesin motor domain 191 779 IPR036961 -
Spst10g01585 1175 SMART MYSc_2a 173 851 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 SMART iq_5 874 896 IPR000048 GO:0005515
Spst10g01585 1175 SMART iq_5 923 945 IPR000048 GO:0005515
Spst10g01585 1175 SMART iq_5 851 873 IPR000048 GO:0005515
Spst10g01585 1175 SMART iq_5 900 922 IPR000048 GO:0005515
Spst10g01585 1175 Gene3D - 340 399 - -
Spst10g01585 1175 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 Pfam IQ calmodulin-binding motif 856 873 IPR000048 GO:0005515
Spst10g01585 1175 Pfam IQ calmodulin-binding motif 926 942 IPR000048 GO:0005515
Spst10g01585 1175 ProSiteProfiles Myosin motor domain profile. 195 850 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 898 IPR027417 -
Spst10g01585 1175 FunFam Unconventional myosin-XIX 548 740 - -
Spst10g01585 1175 CDD MYSc_Myo8 195 838 IPR036022 -
Spst10g01585 1175 Gene3D Myosin VI head, motor domain, U50 subdomain 401 718 - -
Spst10g01585 1175 ProSiteProfiles IQ motif profile. 924 953 IPR000048 GO:0005515
Spst10g01585 1175 MobiDBLite consensus disorder prediction 72 99 - -
Spst10g01585 1175 Pfam Myosin head (motor domain) 195 838 IPR001609 GO:0003774|GO:0005524|GO:0016459
Spst10g01585 1175 Gene3D - 784 848 - -
Spst10g01585 1175 ProSiteProfiles IQ motif profile. 877 904 IPR000048 GO:0005515
Spst10g01585 1175 Coils Coil 970 1018 - -
Spst10g01585 1175 Gene3D - 854 902 - -
Spst10g01585 1175 Gene3D - 903 947 - -
Spst10g01585 1175 Gene3D - 546 740 - -
Spst10g01585 1175 FunFam Myosin heavy chain 340 396 - -
Spst10g01585 1175 ProSiteProfiles IQ motif profile. 854 881 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01585 Spst-Chr10 16512269 16529569 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01585 7 1173 Myosins gene family AT1G50360 73.193 0.0 1731
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01585 - K10357 gmx:100782618 2122.44
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01585 10 16512269 16529569 Spst10g01585 10 16512269 16529569 ECH