Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01572 ATGTTGACACATTGCCATGAATTGTGCAAACCAGTCTCTATCATGATTCTAGTAAACTTGGCCCTGGCTTTTGTCAATTTACTTCTGAAGAAGGTTCTTAATGAAGGAATGGAGTACATGTGCATTATAACATATCGACAGGCAGTTTCATTTATCTTCATGGCACCTATTGCTTGCATCTATGAAAGGAAACACAAAGTGGAGGTTCACATAATATGTCTCTTGTTCCTCAGTGCCCTACTCGGAATAACACTTCCCCAATACCTGTTCCTTCTTGGACTTGAATATACGTCTGCCACATTCGCATGTGCGTTCCTCAATATGGTGCCTGTATTTACGTTCATTATGGCATTGCCATTTGGGATAGAGAAGGTGAACATGCAAAGCAAGGGTGGTAGAGCTAAAGTCATGGGAACTTTTGTGTGCATTGGTGGAGCTTTGTTATTGGTCCTTTATAAAGGAATCCCCCTTATCAAGCCACAATCTCAACACATAGCTAACGAAGTTACAAGTACACCTCCAACTGCCAAGTTAGAGACGTGGATTATAGGTTCTATACTTCTGACTGTAGGTTGCTTCCTGTGGTCTTCATGGTTCATTATACAAGCAAAGACTAGCAAGAAATACCCATGTCAATACTCTAGCACAGCTATTTTGTCACTTTTCGCTGCCATTCAATCAGCAATATTAACTTTGATCATCAAGAAAAATAATGCTTCGTGGATTCTCAAAGGAAAGCTAGAAATATTAAGTATTCTATATGCTGGATTGGTAGGGTCGGGCCTGTGCTATGTGGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACCGCAGCTTTTACCCCCCTTATCCAGATATTTGTGGCCATGCTTGATTTCTCTGTTCTAAAGGAGGAAATTTATTTGGGAAGTGTTGCAGGATCTGCCTTGGTTATTTCTGGCATGTATATTCTTCTGTGGGGAAAAGGTAAAGAGGAAGGACAACATGTTCTGAAGGATACGCAAACAAGTCAAGATGTAGAACGTCAATAG 1038 0.4075 MLTHCHELCKPVSIMILVNLALAFVNLLLKKVLNEGMEYMCIITYRQAVSFIFMAPIACIYERKHKVEVHIICLLFLSALLGITLPQYLFLLGLEYTSATFACAFLNMVPVFTFIMALPFGIEKVNMQSKGGRAKVMGTFVCIGGALLLVLYKGIPLIKPQSQHIANEVTSTPPTAKLETWIIGSILLTVGCFLWSSWFIIQAKTSKKYPCQYSSTAILSLFAAIQSAILTLIIKKNNASWILKGKLEILSILYAGLVGSGLCYVAMSWCVKQRGPVFTAAFTPLIQIFVAMLDFSVLKEEIYLGSVAGSALVISGMYILLWGKGKEEGQHVLKDTQTSQDVERQ 345
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01572 345 Pfam EamA-like transporter family 13 150 IPR000620 GO:0016020
Spst10g01572 345 Pfam EamA-like transporter family 183 321 IPR000620 GO:0016020
Spst10g01572 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 45 153 - -
Spst10g01572 345 PANTHER WAT1-RELATED PROTEIN 11 336 IPR030184 GO:0016020|GO:0022857
Spst10g01572 345 SUPERFAMILY Multidrug resistance efflux transporter EmrE 246 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01572 Spst-Chr10 16392657 16394453 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01572 7 255 Nodulin-like Gene Family AT3G30340 47.012 1.21e-80 245
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01572 - - gmx:100806247 622.083