Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01534 ATGGGTAGTTGTGGAAGAGAAGGAGCTGTTAGACAATATATAAGGTCGAAGGTTCCTCGTTTAAGATGGACTCCTGAGCTGCACCGTTGCTTTGTTCACGCCATTGATAGTCTTGGAGGTCATCATAAGGCTACTCCCAAGCTCGTTCTTCAGTTGATGGATGTCAAAGGGCTCACAATTTCACACGTCAAGAGTCATCTTCAGATGTACAGAAGCATGAGGGGTGACTTGGGCAGACAAGGTAGGACACCCTCCCAACATAGGAACCAATCTTTTGAGGAGCACGATGATGGGTGTGTTGATGAAGTGAATGATGTAGGTGTTGAGTACTCATGTTCGAAACCCATGGGAAGAGAATCTGATTCCTTCTTCGGCCACAGCAATCTCCCTCCAAAAAGAGCAAGAATCGAGACGAGGAGTTCCATCTCAGAGAGCCTGCAATGCAGCCAAAGATTATGTGATGCAGTTCCAAATCCGTACTGTTTTTATGATTATCTGCAGAAGCCCATGGTTGAGCAGAAGGGAATAAAGGAGTTCTGTGAGGCTTCAACATGGCAGACACAACCCCATTCCTCTCTGTTACCACATTTTCCCAACCTCACTTCATTCAAATGCCCTAACCAACAATCAGATTTCCTCCAGGTCACAAAATTAAATGAAGGAAAGAGCAGTGGAAAGCCAATTAATGTAGATGTGAAAAATGAGACAGGTGATACAGAAGTTGAAGATGTAGGAGGGTATGAATTGTCGTTGTCGCTTACATTGCCAAATCCTTCACCTCAGAGAAGTAATGGTTCATGTTCAGCCAGTGAGATCAGTGAAGCAATCTCATCATACCCTGCTGCAGGGTTTAGCAACTACAAGGACTGCACTTGTTCAAACACTCTCAAAGAAACAATTAATTTGGACCTTTCTTTAGCCCTATGTGGCAATTGA 936 0.4412 MGSCGREGAVRQYIRSKVPRLRWTPELHRCFVHAIDSLGGHHKATPKLVLQLMDVKGLTISHVKSHLQMYRSMRGDLGRQGRTPSQHRNQSFEEHDDGCVDEVNDVGVEYSCSKPMGRESDSFFGHSNLPPKRARIETRSSISESLQCSQRLCDAVPNPYCFYDYLQKPMVEQKGIKEFCEASTWQTQPHSSLLPHFPNLTSFKCPNQQSDFLQVTKLNEGKSSGKPINVDVKNETGDTEVEDVGGYELSLSLTLPNPSPQRSNGSCSASEISEAISSYPAAGFSNYKDCTCSNTLKETINLDLSLALCGN 311
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01534 311 SUPERFAMILY Homeodomain-like 17 72 IPR009057 -
Spst10g01534 311 PANTHER MYB FAMILY TRANSCRIPTION FACTOR PHL7-LIKE 7 98 IPR046955 GO:0003700
Spst10g01534 311 Gene3D - 18 74 - -
Spst10g01534 311 Pfam Myb-like DNA-binding domain 21 71 IPR001005 -
Spst10g01534 311 NCBIfam myb-like DNA-binding domain, SHAQKYF class 19 72 IPR006447 GO:0003677
Spst10g01534 311 FunFam Myb family transcription factor 17 75 - -
Spst10g01534 311 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 15 75 IPR017930 -
Spst10g01534 311 MobiDBLite consensus disorder prediction 76 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01534 Spst-Chr10 15983007 15986373 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01534 1 74 G2-like Transcription Factor Family AT1G14600 74.684 5.92e-35 125
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GARP-G2-like Spst10g01534 Myb_DNA-binding 1.3e-05 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01534 - - gmx:100787188 457.988