Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01527 ATGAAAGAATCAGAAGAGGTGCAATTACAACAAAGATCAATTGAAGAAGAATCTCATCCAAGAATTGTCAAAGCTCCAGTATTTTTGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCCAGTGCAGGATATGGCTTGAACCACACTGTTGCAGCTGATATTTTTGAAACTGTAAGGTCCAGGAATGGATTAACAGTTGCGATAGTTATAAAGCCATTTAGATTTGAAGGGTTTAGACGACAAAATGAGGTGAAAGCCTTGACGCAGAGACTTAAGGACCACACAAATTTACTTATTGAAATTGATATTGATTCACTGCTTGAGAAAGACTTGTTGACTCTAGATGAGGCCATGAAGACTACTAATGATGCAGTTTTGCTAGCTATTAAGGCTGTCTCTGTTCTAAAATCTATATTGGAATCCTATAGAGAAGCAGGGATTGGATTTGGAGCTGCTGATAACATCAAAGCTTCAATTTTGCAGCCTATATTTGAGAGTCCTTTCCTGGGTGTTCGTTTGAAGGATCCAAATAGCATAGTTATATGCACTATTGCATGTTCTGGACCCGTCGATGATAGAGATATAGCAATCTTTATTCGTACTTTTCGTCAAACAACAGATTACACAAAGGATATTATAGTATCAACAATACATGACCCTACTGTCGAGCCGAACCTACTCATAACAACAGTGCTTACACTTGGATGTTTAAATGTGCAACGATCTTCTCAGAATGGTGGGATACTATCCAGACTTGTACAGCATTTTCCTCTTATATTTAGCTTTTGGGGAAGACATAATCAGCAACAAGTTGGCCCTGCAAAGCAGACTGAAGTATTTCTTCCAGAAATGTTGATTTCTGTTGATGTTGATGAGAGGACAAATCGGATTGCTTCAGGTAACATAAATAGCAATTTTGACAAATACTGTGAGGAGTTGGAGCCAGCAATGAACAACATTAGCTCTGAATTGCCTGCTTCGAGGGGTTCTGGGAAAAGTGAAGATTTACTTGACACCACTTCCCACTATAACATCCTCTATGACTCTATTTCTGAAAGAGGGGACTCTGCTTTTCAAAGGGAGCAACTTGAGAACTGGAATCTGGGTCCTGGATTCGAGGTGGCAAAGAAATGGGCCCAAGAAAAAGCAGCTGATGCTACACCAATTGTTGATAACCTAAGCATCTTTCTCCTTCCTGTTGGTGTGAGGCCTTCAGAAGAGTTGAAAGAAAGACTGGAACTCTCATTTATGACAAAACAGCATGACCCAGATAATGATGATAATGATGTGAGAACACAAACATTAAATGGAGGTACGTCTCCTTGGAGTGTGGCAACTGATGCTAGTTTGGAAGCAGTTATGGAATTTGCATCTTCACTTCTGAAAGGCAAGAATGCTAATAAATCAAAGAAAAATGGAGTACTGTCTGTTCGTGCTGCGTCTATGTTGCGCAAGGCACAACCGTTTTATGAGGAGGCAGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTGGTGGAAATGCAATACAGGGGAGGAAGATACAAGGGACGATGCCAGGGAGGTCTGCCCGAAGGGAAGGGGCGTCTTGTTCTCGGAGATGGGAGCATATATGATGGCCTATGGCGGTATGGTAAGAGATCTGGTCCAGGTACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATCGTGGAGGGATGATGTCATACATGGCAAGGGTTGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAGCTTTTGGAAGGGAAAGGCTAATGGCGAGGGGCGATTCTACACAAAGTCCGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGACATGGCCAGTTTCTCTGTATTAAATCGAACGGGACAAGGTACACTGAAATTTGGGATCATGGTGTTCGTGTAGATAGCAAGCATTTAGACAGATAA 1941 0.4152 MKESEEVQLQQRSIEEESHPRIVKAPVFLKSCSKTIVLVASAGYGLNHTVAADIFETVRSRNGLTVAIVIKPFRFEGFRRQNEVKALTQRLKDHTNLLIEIDIDSLLEKDLLTLDEAMKTTNDAVLLAIKAVSVLKSILESYREAGIGFGAADNIKASILQPIFESPFLGVRLKDPNSIVICTIACSGPVDDRDIAIFIRTFRQTTDYTKDIIVSTIHDPTVEPNLLITTVLTLGCLNVQRSSQNGGILSRLVQHFPLIFSFWGRHNQQQVGPAKQTEVFLPEMLISVDVDERTNRIASGNINSNFDKYCEELEPAMNNISSELPASRGSGKSEDLLDTTSHYNILYDSISERGDSAFQREQLENWNLGPGFEVAKKWAQEKAADATPIVDNLSIFLLPVGVRPSEELKERLELSFMTKQHDPDNDDNDVRTQTLNGGTSPWSVATDASLEAVMEFASSLLKGKNANKSKKNGVLSVRAASMLRKAQPFYEEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLGDGSIYDGLWRYGKRSGPGTFYFKNGDMFQGSWRDDVIHGKGWFYFHTGDRWFASFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCIKSNGTRYTEIWDHGVRVDSKHLDR 646
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01527 646 Pfam MORN repeat 537 559 IPR003409 -
Spst10g01527 646 Pfam MORN repeat 560 582 IPR003409 -
Spst10g01527 646 Pfam MORN repeat 587 604 IPR003409 -
Spst10g01527 646 Pfam MORN repeat 519 535 IPR003409 -
Spst10g01527 646 Pfam MORN repeat 607 618 IPR003409 -
Spst10g01527 646 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 5 642 - -
Spst10g01527 646 SMART morn 604 625 IPR003409 -
Spst10g01527 646 SMART morn 535 556 IPR003409 -
Spst10g01527 646 SMART morn 558 579 IPR003409 -
Spst10g01527 646 SMART morn 512 533 IPR003409 -
Spst10g01527 646 Gene3D - 512 572 - -
Spst10g01527 646 Gene3D Tubulin/FtsZ, GTPase domain 7 234 IPR036525 -
Spst10g01527 646 Gene3D - 585 644 - -
Spst10g01527 646 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 511 639 - -
Spst10g01527 646 SUPERFAMILY Tubulin nucleotide-binding domain-like 30 133 IPR036525 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01527 9 645 PP2C-type Phosphatase Gene Family AT1G75010 45.852 0.0 541
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01527 - - gsj:114371951 1053.12