Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01491 ATGGGAAAGAAAGCTTTGAAACTTCCCTCTCTTTTCAAAACCAAAGAAGCACCAAGAAAGCATCAACACCATCATCACAATCATCATCCATGGCAATTCATACCCTCTTGTGGCCACTCCAAGACCCTCTCTTTCCGAGGTGGCCATGATGACATCTTTAAGACAGTTAACTCCGTGTTCTTCGACCCTTCAGAGAGTGTCATCGAAACTCCCAAGTCATGGTTCACAACCTCATCTGAATCTGCCAGCATCTCAACCGAGTCAGAAGACTACTACTGCTGCGATGGGGAGTCTTTGGAGATGTTGGTACGTGGTGTGAGATCAGAGAGGCTTTTCTTCGAGCCAGGTGACACAAGCTCCATCTTGGAAAAGGCCAAGGCAAGTGGGTTTCCCTTCAAAGAAAGTGTGGTCCTTGCCGTGGAGTCGGAGGACCCTTACGAGGATTTCAAGAGATCAATGGAGGAGATGGTCGAGTCTCATGGAGTAAGGGATTGGGAGGGGTTGGAGGAGCTTTTGACTTGGTATCTCAAGGTCAATGGTAGGAACAATCACGGGTATATAGTGGGTGCTTTTGTTGATTTGCTCTTCAGTTTAGCAGCTTCTAATAATTCTAACTCTTGTTCTGATTCAACACCATATTCTTCTGCTATTTCTTCTTTTGCTTCTTCCCCTATGTGCGATGAGATTGTTGAGCATGGGATTGCGAACGATGGTGCTGTAACATCTTAG 729 0.4595 MGKKALKLPSLFKTKEAPRKHQHHHHNHHPWQFIPSCGHSKTLSFRGGHDDIFKTVNSVFFDPSESVIETPKSWFTTSSESASISTESEDYYCCDGESLEMLVRGVRSERLFFEPGDTSSILEKAKASGFPFKESVVLAVESEDPYEDFKRSMEEMVESHGVRDWEGLEELLTWYLKVNGRNNHGYIVGAFVDLLFSLAASNNSNSCSDSTPYSSAISSFASSPMCDEIVEHGIANDGAVTS 242
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01491 242 MobiDBLite consensus disorder prediction 1 28 - -
Spst10g01491 242 ProSiteProfiles OVATE domain profile. 138 197 IPR006458 -
Spst10g01491 242 Pfam Transcriptional repressor, ovate 142 198 IPR006458 -
Spst10g01491 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 24 199 IPR038933 GO:0045892
Spst10g01491 242 NCBIfam uncharacterized plant-specific domain TIGR01568 136 199 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01491 Spst-Chr10 15579630 15580358 Transposed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst10g01491 Ovate 5.7e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01491 - - vun:114190765 415.231
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst1g02689 1 35358598 35359425 Spst10g01491 10 15579630 15580358 ECH
Spst7g00132 7 1002878 1003558 Spst10g01491 10 15579630 15580358 ECH
Spst10g01491 10 15579630 15580358 Spst10g01491 10 15579630 15580358 ECH