Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01487 ATGGCGGTCGCCGTCGGAGATGTCAACACCAATGGTTTCCTCGTCCAGGTTATCACTGGACGGTGGTTCGTGGTGTTCGCCTCCTTCCTTATCATGGCCGCAGCCGGCGCCACCTACATGTTTAGCCTCTACTCCAGCGACATCAAATACACCCTGGCCTACGACCAAACCACCCTCAACCTCCTCAGTTTCTTCAAAGACCTCGGAGGCAATGTCGGCGTCCTCTCCGGCCTCATCAACGAGATCACTCCCCCGTGGGTGGTCCTCGCCATGGGTTCCCTCCTCAACTTCTTCGGCTACTTCATGATATGGCTCGCGGTCACCAAAAGAATACCCAAACCGCAGGTGTGGCACATGTGCCTCTACATCTGCATCGGCGCCAACTCTCAGTCCTTCGCCAACACCGGCTCCCTCGTCACGTGCGTCAAGAACTTCCCCGAGAGCCGTGGCGTCGTGTTGGGTATCCTCAAAGGCTACGTGGGTCTCAGTGGAGCCATCATCACGCAACTCTACTATGCCTTCTACTACGACGATTCCAGGTCCTTGATTTTGCTCATAGCCTGGCTCCCAGCTGCTATCTCCTTCGCTTTCCTTCGAACCATTCGCTACATGAAGCCCGTTCGACAACCCAACGAGCTTAGTGTGTTCTACAAGTTCTTGTATATCTCACTTGGCCTAGCTGGATTTCTCTTGCTCATGATCATAGTTCAGAAAAAAGTGTCTTTCTCGCAAAGTGAGTATGGCGTAAGTGCTGGGGTTGTGCTTCTTTTACTCTTCCTCCCTCTTGCAGTTGTTTTTGTTGAACAATACAAAATCAGAGAGACTCAGAAGCTAGCATTCATTGACCCCTCCCCGGTGAGGATAGCAGCTGAAAGAGAGTTACAGTCAGCAAATGGTAACTCTAACTCGGGTTTGGGTCCAGTTTCAAATATTGAAGAGACTAGATGGTGGCAAAAAGTGTTTAGTCCACCGCCCAGAGGTGAGGACTATACTATACTTCAAGCACTGTTCAGCTGGGACATGATACTTGTATTCGTCGCTGGCACGTGTGGTGTTGGGGGCACGTTGACTGCAATTGATAATCTTGGTCAGATTGGATCCTCGCTAGGGTACTCCAAGGCTAGCATAAGCACATTTGTGTCGTTGGTTAGCATTTGGAATTACATGGGACGTGTTTTTTCTGGGTTTGTGTCTGAACATTTTCTGCAAAAGTACAAGTTCCCTCGACCACTCATGCTCACGCTAACCCTGCTCTTATCCTGCGTCGGTCATCTTCTGATAGCGTTCAACGTGCCCAACGGACTCTACGTGGCATCGGTGATCATCGGGTTCTGCTTTGGCGCGCAATGGCCCCTGGTCTTCGCCATAATTTCGGAGCTGTTCGGGCTCAAGTACTATTCAACTTTGTACAACTTCGGCGGTGCAGCGAGCCCAATCGGGCTTTACCTGCTGAACGTGAGGGTCACCGGCCACTTGTACGACAAAGAGGCTCTGAAGCAATTGGCTGTGGCGGGTATCCCAAGAAACGGTAGCCAGGAATTGACTTGTACTGGGACCAGTTGTTTCAAGCTGTCTTTCATAATTATCACTCTGGCCACCATTTTTGGAGCCATAATTTCACTCATTTTGGTGGCTAGGACTATTCAGTTTTACAAAGGTGATATATACAAGAGGTACCGTGATCAGGTTTTGGAAACCACATCCACCACCGCCACCACCACCACCGTCGAGATGAAGGTGGTCCAAAACGGCGGCGAGAGAGGACAAGAAGCCACAGACCTAGTAGGGTAA 1791 0.5064 MAVAVGDVNTNGFLVQVITGRWFVVFASFLIMAAAGATYMFSLYSSDIKYTLAYDQTTLNLLSFFKDLGGNVGVLSGLINEITPPWVVLAMGSLLNFFGYFMIWLAVTKRIPKPQVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYYAFYYDDSRSLILLIAWLPAAISFAFLRTIRYMKPVRQPNELSVFYKFLYISLGLAGFLLLMIIVQKKVSFSQSEYGVSAGVVLLLLFLPLAVVFVEQYKIRETQKLAFIDPSPVRIAAERELQSANGNSNSGLGPVSNIEETRWWQKVFSPPPRGEDYTILQALFSWDMILVFVAGTCGVGGTLTAIDNLGQIGSSLGYSKASISTFVSLVSIWNYMGRVFSGFVSEHFLQKYKFPRPLMLTLTLLLSCVGHLLIAFNVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGAASPIGLYLLNVRVTGHLYDKEALKQLAVAGIPRNGSQELTCTGTSCFKLSFIIITLATIFGAIISLILVARTIQFYKGDIYKRYRDQVLETTSTTATTTTVEMKVVQNGGERGQEATDLVG 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01487 596 Gene3D MFS general substrate transporter like domains 333 551 IPR036259 -
Spst10g01487 596 Pfam Nodulin-like 21 266 IPR010658 -
Spst10g01487 596 CDD MFS_Mch1p_like 20 537 - -
Spst10g01487 596 SUPERFAMILY MFS general substrate transporter 21 548 IPR036259 -
Spst10g01487 596 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 22 556 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01487 Spst-Chr10 15507180 15508970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01487 15 562 Nodulin-like Gene Family AT2G39210 69.565 0.0 791
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01487 - - gmx:100808975 997.267
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01487 10 15507180 15508970 Spst10g01487 10 15507180 15508970 ECH