Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01486 ATGGCGATAAGTGCAGGTTCCATGGGTGTTCATGGATTGGGAGACATGAAGATTCTCGCTATCCAAGTCATCACCGGAAGATGGTTCGTCGTCTTTGCCTCCTTTCTAATCATGGCTGCCGCTGGAGCCACGTACATGTTCGCCCTTTACTCCAGCGACATCAAAGCCACTCTTGGCTACGACCAAACCACTCTCAATCTCCTCAGTTTCTTCAAGGACTTGGGCACCAACGTTGGAGTCCTCTCAGGCCTTATCAACGAGCTCACTCCACCCTGGGTGGTGCTAGCCATCGGTGCTGTCCTAAACTTCTTTGGTTACTTCATGATATGGCTCTCAGTCACCCAAAAAATAGCCAAACCCCAAGTATGGCAGATGTGTCTCTACATATGCATAGGTGCTAACTCTCAGTCGTTCGCCAACACTGGTTCCCTGGTCACGTGTGTCAAGAACTTTCCAGAAAGTCGTGGGGTTGTGTTGGGCATCCTCAAAGGCTACCTGGGTCTTAGTGGTGCAATCATCACACAACTCTACTCTGCTATTTACTATGACGACACAAAGGCTTTGATTTTGTTCATAGGTTGGCTCCCAGCTGCTACTTCCTTAGTTTTCCTTCGAACCGTTCGCTACATGAAGCCGGTTAGGCAGTCTAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCTGGGTTTCTTTTGGTCATGATTATTATACAGAAAAGGGTCAACTTCACTCAGAGTGAGGACGGTGTGACCGCTGCTATTGTGCTCTTCTTGCTCTTCCTCCCACTTGCTATTGTTTCCATCGAAGAGTATAAGATCTGGCAGAGTAAAAGACTTGCTTTGGTTGATCCTTCCCCGGTGAAAATAGTAACCGAGAGTGAAAGGGTTAAACCGAAAGAGTCTGCTAATGGTAGCAATTCAGTCTCAGCAGTTTCCAACGACACCAAGTGGTGGGAAAATGTGTTTAGTCCACCAGAAAGAGGTGAGGACTATACAATACTTCAAGCACTATTCAGCATTGACATGTTTATCCTATTCATATGTAGCATCTGTGGTATTGGGGGCACGTTGACCGCAATAGATAACCTGGGTCAGATAGGAAATTCGCTTAGATACCCCAAGAAGAGCATAAGCACTTTCGTGTCCCTAGTAAGCATTTGGAATTATCTAGGACGAGTTTTCTCTGGATTTGTTTCTGAACACTTTCTACACAAGTACAAGTTCCCTCGTCCTCTTATGCTTACTTTAACCATGCTCCTATCATGCGTTGGACACCTTCTGATAGCATTCGATGTGCCAAGTGGTCTTTATGCGGCTTCGGTAATCATAGGGTTTTGTTTTGGAGCTCAGTGGCCTTTACTTTTTGCCATTATATCTGAGCTTTTTGGACTAAAATATTATGCAACTTTGTACAATTTTGGAAGTGCAGCAAGTCCACTAGGGCTATATGTGCTTAATGTGGTAATGACTGGGCATTTGTATGACAAAGAAGCAAAGAAGCAACTCGCAGCGTTGGGGCTTCAAAGAAAGGAAGGACAGGAATTGAATTGCATAGGAGTCCATTGCTTCAAGTTATCCTTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTCTGGTGGCTAGGACAAGAATGTTTTACAAAGGTGACATATACAAGAGATTCCGCGATGCAGCCACGATAGAAGCTGAACTGACAGTGGTAGAGGACGAAAACAAGGCAGAGAAAGATGTCAAACATGTGGTGCCAACTCATGATCACGAACAGCACCAGGACTAA 1809 0.4483 MAISAGSMGVHGLGDMKILAIQVITGRWFVVFASFLIMAAAGATYMFALYSSDIKATLGYDQTTLNLLSFFKDLGTNVGVLSGLINELTPPWVVLAIGAVLNFFGYFMIWLSVTQKIAKPQVWQMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYLGLSGAIITQLYSAIYYDDTKALILFIGWLPAATSLVFLRTVRYMKPVRQSNELKVFYNFLYISLGLAGFLLVMIIIQKRVNFTQSEDGVTAAIVLFLLFLPLAIVSIEEYKIWQSKRLALVDPSPVKIVTESERVKPKESANGSNSVSAVSNDTKWWENVFSPPERGEDYTILQALFSIDMFILFICSICGIGGTLTAIDNLGQIGNSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLHKYKFPRPLMLTLTMLLSCVGHLLIAFDVPSGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSAASPLGLYVLNVVMTGHLYDKEAKKQLAALGLQRKEGQELNCIGVHCFKLSFIIITAATFFGAIVSLILVARTRMFYKGDIYKRFRDAATIEAELTVVEDENKAEKDVKHVVPTHDHEQHQD 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01486 602 SUPERFAMILY MFS general substrate transporter 27 554 IPR036259 -
Spst10g01486 602 CDD MFS_Mch1p_like 26 543 - -
Spst10g01486 602 Gene3D MFS general substrate transporter like domains 340 556 IPR036259 -
Spst10g01486 602 Pfam Nodulin-like 27 271 IPR010658 -
Spst10g01486 602 FunFam Nodulin family protein 338 559 - -
Spst10g01486 602 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 28 562 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01486 Spst-Chr10 15501496 15503304 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01486 14 567 Nodulin-like Gene Family AT2G39210 71.685 0.0 830
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01486 - - pvu:PHAVU_007G024800g 1072.38
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01486 10 15501496 15503304 Spst10g01486 10 15501496 15503304 ECH
Spst1g02860 1 37201158 37202978 Spst10g01486 10 15501496 15503304 ECH
Spst7g01019 7 18156652 18158406 Spst10g01486 10 15501496 15503304 ECH