Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01485 ATGGCGCTGGGGGGACATGCAGGTTCCATTGGTGTTCATGGATGGGGAGACATGAAGAGTCTCACCGTCCAAGTCATCACCGGACGATGGTTCGTCGTCTTCGCCTCCTTTCTAATCATGGCTGCTGCTGGAGCCACCTACATGTTCGGTCTCTACTCCAGCGACATCAAAGCCACCCTTGGTTACGACCAATCTACTCTTGATCTCCTTAGTTTCTTCAAGGACTTGGGTAGCAACGTCGGAATCCTCGCAGGCCTTATCAACGAGCTCACTCCACCTTGGGTGGTCCTAGCCATTGGTGCCATCCTAAACTTCTTTGGCTACTTCATGATATGGCTTTCGGTTACTAAAAGAATTGCCAAACCCCAAGTGTGGCAGATGTGTCTCTACATCTGCTTAGGTGCTAACTCTCAGTCCTTCGCCAACACCGGTTCCCTTGTTACATGTGTCAAGAACTTCCCCGAAAGCCGTGGGGCTGTGTTGGGCATCCTCAAAGGCTACGTGGGTCTTAGTGGTGCGATCATCACACAATTGTACTCTGCTATTTATTATGATGACACAAAGGCTTTGATTTTGCTCATCGGTTGGCTCCCAGCTGCTATTTCCTTTGTTTTCCTTCGAACCATCCGCTACATGAAGCCGGTTAGGCAACCTAATGAGCTCAAGGTTTTCTACAACTTTCTGTATATTTCTCTTGGCCTTGCGGGGTTTCTTTTGGTCATGATTATTGTACAGAAGAGGGTGAACTTCACTCAGAGTGAGTATGGTGTGAGTGCTGCAATTGTTGTCTTCTTGCTCTTCGTCCCAATTCTTGTCGTTTCTATGGAAGAACACAAGATTTGGCAGAGTAAAAGACTTGCTTTACTTGACCCCTCGCCCGTGAAAATAGTCACTGAGGGTGAAAAGGTGAAACAGAGTGAGACTACTAACGGGATCACTTCAATTGCAGCAGTTTCCAACGACACCAGGTGGTGGGAAAATGTGTTTAGTCCACCAGAAAGAGGTGAGGACTATACAATACTTCAAGCGCTATTCAGCGCCGACATGTTAATACTTTTCATAACTTGCATATGTGGTGTTGGAGGCACGTTGACTGCAATAGACAACTTGGGACAAATAGGAACCTCTCTTAGATACCCTAAGAAAAGTATAAGCACTTTTGTGTCCCTAGTGAGCATTTGGAACTATCTAGGACGTGTTTTCTCTGGATTTGTTTCTGAACATTTTCTACAAAAGTACAGGTTTCCTCGTCCTCTTATGCTTACTTTAACTCTGCTCTTATCGTGTGTTGGTCACCTTCTGATAGCATTGGATGTACCAAATGGACTTTATGCTGCTTCGGTGATTATCGGGTTTTGCTTTGGCGCTCAGTGGCCTTTACTTTTTGCCATTATATCCGAGCTTTTTGGACTTAAATATTATGCAACTTTGTACAATTTTGGAAGCGTAGCAAGTCCACTAGGACTATATGTACTTAATGTGAAGATGACTGGGTATTTGTATGACAAAGAAGCAAAGAAGCAATTGGTAGCATTGGGGCTTAAAAGAAAGGAAGGGCAAGAATTGAATTGTATTGGGATCGATTGCTTCAAGTTATCCTTCATTATTATCACAGCTGCAACTTTCTTTGGTGCCATTGTTTCACTGATTCTGGTCGCTAGGACAAGAAAGTTTTACCAAACTGACATATACAAGAGATTCCGGGATGCAGCCACGGTGACAGAAACCGAAATGGAGGGGGTAGAGAGCAAGAGCAAGGCAGAGAAAGATGTCAAATATGTGGTGCCAACTGAGAAGTAG 1800 0.4467 MALGGHAGSIGVHGWGDMKSLTVQVITGRWFVVFASFLIMAAAGATYMFGLYSSDIKATLGYDQSTLDLLSFFKDLGSNVGILAGLINELTPPWVVLAIGAILNFFGYFMIWLSVTKRIAKPQVWQMCLYICLGANSQSFANTGSLVTCVKNFPESRGAVLGILKGYVGLSGAIITQLYSAIYYDDTKALILLIGWLPAAISFVFLRTIRYMKPVRQPNELKVFYNFLYISLGLAGFLLVMIIVQKRVNFTQSEYGVSAAIVVFLLFVPILVVSMEEHKIWQSKRLALLDPSPVKIVTEGEKVKQSETTNGITSIAAVSNDTRWWENVFSPPERGEDYTILQALFSADMLILFITCICGVGGTLTAIDNLGQIGTSLRYPKKSISTFVSLVSIWNYLGRVFSGFVSEHFLQKYRFPRPLMLTLTLLLSCVGHLLIALDVPNGLYAASVIIGFCFGAQWPLLFAIISELFGLKYYATLYNFGSVASPLGLYVLNVKMTGYLYDKEAKKQLVALGLKRKEGQELNCIGIDCFKLSFIIITAATFFGAIVSLILVARTRKFYQTDIYKRFRDAATVTETEMEGVESKSKAEKDVKYVVPTEK 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01485 599 SUPERFAMILY MFS general substrate transporter 29 557 IPR036259 -
Spst10g01485 599 CDD MFS_Mch1p_like 28 545 - -
Spst10g01485 599 Gene3D MFS general substrate transporter like domains 322 561 IPR036259 -
Spst10g01485 599 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 30 562 - -
Spst10g01485 599 FunFam Nodulin family protein 340 561 - -
Spst10g01485 599 Pfam Nodulin-like 29 273 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01485 Spst-Chr10 15488763 15490562 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01485 16 569 Nodulin-like Gene Family AT2G39210 73.297 0.0 843
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01485 - - pvu:PHAVU_007G024800g 1026.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01485 10 15488763 15490562 Spst10g01485 10 15488763 15490562 ECH