Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01475 ATGTCACAAACCTACGGTCCCGTGTTTCTACTCAAACTAGGTTCTAAAAACTTGGTTGTGGTCTCTGATCCCGAGCTTGCCACCCAAGTGCTCCATTCACAAGGTGTGGAATTTGGCTCGCGCCCACGAAACGTTGTGTTTGATATCTTTACCGGGAACGGTCAAGACATGGTTTTCACTGTTTACGGTGATCACTGGCGCAAGATGCGCAGAATCATGACGCTGCCATTCTTCACCAACAAGGTTGTCCACAACTACAGCAATATGTGGGAGGAGGAGATGGACTTGGTGGTGCGTGATCTCAGCGTGAATGAGAGAGTGAGGAGCGAAGGGATTGTTATCAGAAAGCGGCTTCAGTTGATGCTGTACAATATCATGTATAGGATGATGTTTGACGCCAAGTTCGAGTCTCAAGAGGACCCTTTGTTCATCCAGGCCACGAGGTTTAACTCTGAGAGAAGTCGTTTGGCACAGAGTTTTGAATACAATTATGGGGATTTTATACCATTGCTCAGGCCATTCTTAAGGGGATATCTCAACAAGTGCAAGGACTTGCAATCTAGGAGGCTTGAATTTTTCAACACCCACTATGTTGAGAAAAGAAGACAAATAATGGCTGCCAATGGGAAGAAGCACAAGATCAGTTGTGCAATCGATCACATTATAGATGCTCAGATGAAGGGAGAAATCAGTGAAGAGAATGTGATCTATATAGTAGAAAACATCAATGTTGCAGCAATTGAGACAACATTATGGTCCATGGAGTGGGCAATAGCAGAGTTGGTCAATCATCCAAGAGTGCAAAACAAGATTCGTGATGAAATATCAAAGGTCCTTATAGGGGAGCCAGTGACAGAATCCAACCTACACGAGCTACCATACCTACAGGCCACTGTGAAAGAAACACTGAGACTTCACACCCCAATTCCTCTTTTGGTGCCCCACATGAACCTGGAAGAAGCAAAATTAGGAGTTTACACTATTCCAAAAGAGTCCAAGGTGGTGGTAAATGCTTGGTGGCTTGCCAACAACCCAACATGGTGGAAGAATCCAGAGGAGTTTAGACCAGAAAGGTTTTTGGAAGAGGAGTGTGCAACAGATGCTGTTGCAGGAGGAAAGGTTGATTTTAGGTTCGTGCCATTTGGTGTGGGAAGGAGGAGCTGTCCTGGAATCATACTTGCTTTACCAATACTTGGACTTGTGATTGCAAAGTTGGTGTCAAATTTTGAGCTGAGTGCTCCAGAAGGGACAAAGATAGATGTGAGTGAAAAAGGAGGACAATTCAGCTTGCACATTGCCAACCACTCCACTGTGTTGTTCCATCCAATTAGGACACAATGA 1341 0.4474 MSQTYGPVFLLKLGSKNLVVVSDPELATQVLHSQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVHNYSNMWEEEMDLVVRDLSVNERVRSEGIVIRKRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLEFFNTHYVEKRRQIMAANGKKHKISCAIDHIIDAQMKGEISEENVIYIVENINVAAIETTLWSMEWAIAELVNHPRVQNKIRDEISKVLIGEPVTESNLHELPYLQATVKETLRLHTPIPLLVPHMNLEEAKLGVYTIPKESKVVVNAWWLANNPTWWKNPEEFRPERFLEEECATDAVAGGKVDFRFVPFGVGRRSCPGIILALPILGLVIAKLVSNFELSAPEGTKIDVSEKGGQFSLHIANHSTVLFHPIRTQ 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01475 446 Gene3D Cytochrome P450 1 439 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 234 251 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 121 139 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 296 314 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 337 361 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 254 280 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 26 47 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 378 388 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 2 21 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS E-class P450 group I signature 388 411 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS P450 superfamily signature 379 388 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS P450 superfamily signature 245 262 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 PRINTS P450 superfamily signature 297 308 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 SUPERFAMILY Cytochrome P450 2 431 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 Pfam Cytochrome P450 2 433 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Spst10g01475 446 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 381 390 IPR017972 GO:0005506|GO:0016705
Spst10g01475 446 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 1 443 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01475 Spst-Chr10 15393643 15395414 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01475 2 442 Monolignol Biosynthesis Gene Families AT2G30490 64.865 0.0 603
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01475 K00487 - gmx:100812188 859.366