Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01460 ATGAAGTTAAGTTGCAATGGTTGTCGCATACTCCGCAAAGGTTGCAGTGAAAATTGCATCATCAGATCTTGCCTTGAGTGGATAAACTCTCCCGAGTCCCAAGCCAATGCCACCCTGTTCCTTGCAAAATTCTATGGTCGTACTGGCTTTCTCAGCCTCATCACTGCAGCCCCTCAACACCTTCGTCCAGTTGTGTTCAGGTCACTGTTATATGAGGCATGTGGGAGACTAGTGAATCCGACTTATGGGTCATTAGGTTTGTTCTGGACTGGGGAATGGGCCCAGTGTGAAGCCGCAGTTGAAGCTGTGTTGACTGGGTCAAAAATAAACAATCTAACGTTTTCTCCTTCGAAAACCTCAGAGACACTTGCTAGCAATCGTAGTTTCTCAACATTTGATATGCAGAAGGAAACTAATGTGGAAGCCATAAATGCTACTGAGTTCAAGAGAGTCCATGAAACCAAGTTGGAGTTGGAACTGCTTTCGTTGCCAATCAACATATGGCAATGA 510 0.451 MKLSCNGCRILRKGCSENCIIRSCLEWINSPESQANATLFLAKFYGRTGFLSLITAAPQHLRPVVFRSLLYEACGRLVNPTYGSLGLFWTGEWAQCEAAVEAVLTGSKINNLTFSPSKTSETLASNRSFSTFDMQKETNVEAINATEFKRVHETKLELELLSLPINIWQ 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01460 169 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Spst10g01460 169 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 150 - -
Spst10g01460 169 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01460 Spst-Chr10 15133302 15134095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01460 1 137 AS2 family AT1G68510 57.971 1.57e-59 183
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst10g01460 LOB 6e-22 No_clan