Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01454 ATGAAGTTAAGTTGCAATGGTTGTCGCATACTCCGCAAAGGTTGCAGTGAAAATTGCATCATCAGATCTTGCCTTGAGTGGATAAACTCTCCCGAGTCCCAAGCCAATGCCACCCTGTTCCTTGCAAAATTCTATGGTCGTACTGGCTTTCTCAGCCTCATCACTGCAGCCCCTCAACACCTTCGTCCAGTTGTGTTCAGGTCACTGTTATATGAGGCATGTGGGAGACTAGTGAATCCGACTTATGGGTCATTAGGTTTGTTCTGGACTGGGGAATGGGCCCAGTGTGAAGCCGCAGTTGAAGCTGTGTTGACTGGGTCAAAAATAAACAATCTAACGTTTTCTCCTTCGAAAACCTCAGAGACACTTGCTAGCAATCGTAGTTTCTCAACATTTGATATGCAGAAGGAAACTAATGTGGAAGCCATAAATGCTACTGAGTTCAAGAGAGTCCATGAAACCAAGTTGGAGTTGGAACTCACTCTTGGCTTTCGTTCTCGTGTGAGGAGAAGTGACAAGTGGTTTAACTTGACGTTAGGTGATAGGCCTTCTGCTCTGGATAACTTGCACTTCTGGCACAGGAATTTGATGGATCCAATGATAATTGACATTATACTGGTTCATGATGTGGCTGGTTCTTCTGTTGAGACAGTCATAGAGAGAAAATATATTCAGTAA 678 0.441 MKLSCNGCRILRKGCSENCIIRSCLEWINSPESQANATLFLAKFYGRTGFLSLITAAPQHLRPVVFRSLLYEACGRLVNPTYGSLGLFWTGEWAQCEAAVEAVLTGSKINNLTFSPSKTSETLASNRSFSTFDMQKETNVEAINATEFKRVHETKLELELTLGFRSRVRRSDKWFNLTLGDRPSALDNLHFWHRNLMDPMIIDIILVHDVAGSSVETVIERKYIQ 225
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01454 225 ProSiteProfiles LOB domain profile. 3 109 IPR004883 -
Spst10g01454 225 Gene3D HORMA domain 111 223 IPR036570 -
Spst10g01454 225 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 3 153 - -
Spst10g01454 225 Pfam Lateral organ boundaries (LOB) domain 4 104 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01454 Spst-Chr10 15090920 15092776 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01454 1 137 AS2 family AT1G68510 57.971 3.22e-58 182
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Spst10g01454 LOB 1.3e-21 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01454 - - gmx:100779034 236.498