Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01418 ATGGAACCTGAAGGTCGAATTGTGGTTGCGACAGGGAACCGAGGACCCGGACGAACCCCACTGGACTGGACCACGAGGCTGAAGATAGCAGCGGGAGCGGCGCGAGGCGTGGCTTTCATTCATAACTCCTGCAAGTCCCTTAGACTTACCCACGGTAATATCAAATCCACCAACGTCTTACTCGACAAGCAGGGCAACGCGCACGTGTCTGATTTTGGGCTCTCGGTTTTCGCTGGCCCAGGCCCAGTTGGTGGGAGATCCAACGGCTACCGTGCGCCGGAGGCATCGGATGGTAGAAAACAGACTCAGAAGTCTGACGTGTACTCTTTCGGTGTGCTCCTGCTGGAGATGCTGACAGGGAAGTGCCCCTCCGTGGTTGAGAGTGCAGGCAGTGCTTACGGTGGGGGGGTGGACCTACCAAGGTGGGTCCAGTCAGTGGTGAGGGAGGAATGGACGGCTGAGGTGTTTGATTTGGAGTTGATGAAGTATAAGGATATTGAGGAGGAGATGGTAGGGCTGCTTCAGATTGCAATGGCGTGTACCGCGGCTGCACCTGATCAACGGCCCAGGATGAGCCACGTCGTCAAGATGATTGAGGAGTTGCGTGGGGTCGAGGTGTCTCCGTGTCATGACACGACGGACTCCGTTTCTGAGTCACCTTCCATCTCTGAAGATGCGTGTGGAGCGAGTCAGTGA 696 0.5647 MEPEGRIVVATGNRGPGRTPLDWTTRLKIAAGAARGVAFIHNSCKSLRLTHGNIKSTNVLLDKQGNAHVSDFGLSVFAGPGPVGGRSNGYRAPEASDGRKQTQKSDVYSFGVLLLEMLTGKCPSVVESAGSAYGGGVDLPRWVQSVVREEWTAEVFDLELMKYKDIEEEMVGLLQIAMACTAAAPDQRPRMSHVVKMIEELRGVEVSPCHDTTDSVSESPSISEDACGASQ 231
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01418 231 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 18 203 IPR046959 -
Spst10g01418 231 MobiDBLite consensus disorder prediction 210 231 - -
Spst10g01418 231 ProSiteProfiles Protein kinase domain profile. 1 201 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01418 231 SMART tyrkin_6 5 198 IPR020635 GO:0004713|GO:0006468
Spst10g01418 231 Pfam Protein kinase domain 28 196 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01418 231 Gene3D Transferase(Phosphotransferase) domain 1 12 219 - -
Spst10g01418 231 SUPERFAMILY Protein kinase-like (PK-like) 18 198 IPR011009 -
Spst10g01418 231 MobiDBLite consensus disorder prediction 208 231 - -
Spst10g01418 231 FunFam protein STRUBBELIG-RECEPTOR FAMILY 8 9 208 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01418 Spst-Chr10 14661906 14662601 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01418 3 230 Receptor kinase-like Gene Family AT1G68400 73.593 5.40e-118 349
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst10g01418 Pkinase 9.5e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01418 - - vum:124834036 429.869