Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01416 ATGCAAACTGTCCACCATCTTTCAACTGTGGATCTCTTGGCCTCATTCAGTTTCTTTTCACAACCGCACTGCGGCGTGTTGGCCTTACGTGGCTGTCAAGAACACGACCCATCTGCCCCTAACACCGTCCAACTAACCACCACAACATCAACATGGTACACTGTTCACTGGGTTGAACCTCGTACCATAATAATCCAAGTGGCCCACCTCTTTAACACCATGTTCCACGATTCAGCTGGCAATACAAGGATAGCGTACAACCCATCCCTTTCAATTTTTATCAGCAAAGGAAAATTCTATTGCGCCAAAGGGGGTAGAAGTTGGGTGGTGAAAAATCTGAATATGATACTAGCAGTCGGACCAGGTTCTAAAGGAGCTTTGGTTTATGAGTTTATGTCTAAGGGATTTGAAGAAAATGCCCAATTGACAGAAAGTATGGTTTCAATATTTGGTGCTAGAGGAACAGCAGGCTACATTGCTCCAGAAGTTTTTTCTAGAAATTTTGGTGTAGTATCACATAAGTCGGATGTTTACAGTTATGGAATGATGATCTTGGAAATGATTGGAGGAAGAAAGAATTTTAAAGATGAAGTAGATCCATCAAGTGAAAACATACTTTCCTGA 624 0.4183 MQTVHHLSTVDLLASFSFFSQPHCGVLALRGCQEHDPSAPNTVQLTTTTSTWYTVHWVEPRTIIIQVAHLFNTMFHDSAGNTRIAYNPSLSIFISKGKFYCAKGGRSWVVKNLNMILAVGPGSKGALVYEFMSKGFEENAQLTESMVSIFGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMILEMIGGRKNFKDEVDPSSENILS 207
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01416 207 ProSiteProfiles Protein kinase domain profile. 1 207 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01416 207 SUPERFAMILY Protein kinase-like (PK-like) 148 197 IPR011009 -
Spst10g01416 207 PANTHER RUST RESISTANCE KINASE LR10-RELATED 144 203 IPR045874 GO:0004672
Spst10g01416 207 Gene3D Transferase(Phosphotransferase) domain 1 132 206 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01416 Spst-Chr10 14655283 14657873 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01416 135 204 Receptor kinase-like Gene Family AT4G18250 55.714 3.39e-19 83.2
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst10g01416 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01416 - - ahf:112712060 109.383