Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01415 ATGGTGGAAATGGATGTTGATCCGAATGATCCTTTCAAGTACGTAACTGCGGAAATCGCCTTCGAAATAGAATTGTCTCAGAATTGTTCAAGGTGTCTATACGCTCGCGGAGGCCAATGTCGACTTCACAACACCGGAATGTTTTACTGTGACCTAGGGAATAAATCAACAAAAACTCGTCTTATAGTGACAGCAGTTGCATCTGTGGGAGGAGCATTAGGAGTTCTGATAATTTTGGGTTGGTGCATTAGAAGACGCTTTTACAAGAAGAAAAACCCCACCCACCAAATCATTGAGATGTTCCTGAACACCCACGGTCATCTTGCAGCCAAAAGATACAGTTTTTCAGAGATAAAGAAGGCCACCAATTCCTTCAGAAACAAATTGGGTCAAGGAGGGTATGGTAGCGTGTACAAGGGCAAGTTAAACGATGGAAGCCTTGTGGCAGTGAAAGTTTTAAGCGACTCCAAAGGTAACGGTGAGGAATTCATCAATGAAGTTGCTAGCATCAGTGTCACTTCTCATGTTAACGTTGTTAGTTTACTAGGATTCTGTCAGGAAGGTTCTAAAAGAGCTTTGATATATAAGTACATGCCTAATGGATCACTTGAGAAGTTCATATATGAAGACAAGAATCCACATAAGCTTAATCTTCAATTAAGCTGCAAAACCATCTACAATGTTGCACTTGGCATCGCTCGAGGATTAGAGTATTTACATAGAGGATGCAATACTAAAATCTTGCACTTTGATATAAAACCTCACAATATATTGCTTGATGAGGATTTCTGTCCCAAGATTTCAGATTTTGGACTAGCTAAAATATGTCAGAAAAAAGAGAGTATTGTGTCCTTATTGGGAACTAGGGGAACTGCAGGATACATTGCTCCTGAGGTATTCTGTAGAAATTTTGGAGAAGTCCCTCATAAATCTGATGTATACAGCTATGGAATGGTGGTTCTAGAAATGGCGGGGGGAAAGATGAATAACAATGTTGAAGTGGAATGTTCAAGCGAAATATATTTTCCACACTGGGTTTACAAGCGTCTTGAGCATAATCAAGAGCCTAGATTGAGAAGCATAAAAAATGAAAGTGATAAAGAAATGATACGAAAGTTGATTATTGTGAGCTTATGGTGCATTCAGACAGACCCGTCAAACAGACCAGCAATGAGTAAAGTGGTAGATATGATGGAAGGAAGCTTGGAGCTCTTGCAAATACCACCAAAACCTTATCTCTCTTCACCTCCCAGATCTCCTCCTAGGTCCTCTGATCAAAGCACCTACACTTCTTCGACCATGTATCTTTCTGAGTACTAA 1320 0.4015 MVEMDVDPNDPFKYVTAEIAFEIELSQNCSRCLYARGGQCRLHNTGMFYCDLGNKSTKTRLIVTAVASVGGALGVLIILGWCIRRRFYKKKNPTHQIIEMFLNTHGHLAAKRYSFSEIKKATNSFRNKLGQGGYGSVYKGKLNDGSLVAVKVLSDSKGNGEEFINEVASISVTSHVNVVSLLGFCQEGSKRALIYKYMPNGSLEKFIYEDKNPHKLNLQLSCKTIYNVALGIARGLEYLHRGCNTKILHFDIKPHNILLDEDFCPKISDFGLAKICQKKESIVSLLGTRGTAGYIAPEVFCRNFGEVPHKSDVYSYGMVVLEMAGGKMNNNVEVECSSEIYFPHWVYKRLEHNQEPRLRSIKNESDKEMIRKLIIVSLWCIQTDPSNRPAMSKVVDMMEGSLELLQIPPKPYLSSPPRSPPRSSDQSTYTSSTMYLSEY 439
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01415 439 MobiDBLite consensus disorder prediction 419 439 - -
Spst10g01415 439 Pfam Protein kinase domain 127 396 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01415 439 FunFam serine/threonine-protein kinase PBS1-like 94 197 - -
Spst10g01415 439 FunFam PR5-like receptor kinase 198 410 - -
Spst10g01415 439 CDD TM_EGFR-like 58 91 - -
Spst10g01415 439 PANTHER RUST RESISTANCE KINASE LR10-RELATED 95 422 IPR045874 GO:0004672
Spst10g01415 439 ProSitePatterns Serine/Threonine protein kinases active-site signature. 247 259 IPR008271 GO:0004672|GO:0006468
Spst10g01415 439 ProSitePatterns Protein kinases ATP-binding region signature. 129 151 IPR017441 GO:0005524
Spst10g01415 439 SMART serkin_6 123 398 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01415 439 SUPERFAMILY Protein kinase-like (PK-like) 103 398 IPR011009 -
Spst10g01415 439 Gene3D Phosphorylase Kinase; domain 1 100 197 - -
Spst10g01415 439 MobiDBLite consensus disorder prediction 409 439 - -
Spst10g01415 439 ProSiteProfiles Protein kinase domain profile. 123 413 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01415 439 Gene3D Transferase(Phosphotransferase) domain 1 198 406 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01415 Spst-Chr10 14651612 14653926 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01415 18 430 Receptor kinase-like Gene Family AT5G38260 48.821 6.32e-133 395
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst10g01415 Pkinase 2.9e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01415 - - vun:114191483 743.036