Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01413 ATGGCCCCCCTTGTTTTCAAATCACTAATAATATATTTCTCACAGCTTCTGCTTCTTGTTTCAGCTGAGAATGGAGAGTGTCCGCGATCTTTCCAATGTGGATTTCTTGGCCAGATTCGGTTTCCTTTCACAACCACTCAGCAACAACACTGCGGCTTATTGCCTATACATGGCTGCGAAAATCATGATCCAATGGCTCCCAAAACCCTCCAACTAAACACCTCAACATCAACATCAACATCAACATCAACATCGTACCCTGTTCTGAAGGTAGAAGTACCTCATACCATATTTATCACGGATGTTGAACATGAAAAACATTTACTAAATAGAAGTTGCAATGCATTCAGCAAGAATTTTAGTCTTCCTCACCCCTCTCCTTCAGCTTCTTTCCGGCACAAATATAGTATCACTATTTTCAGATGCCCTCACTCCCTCAAACCCACCCTTCCCAAATATTTTCATAAATATTCAAACTGTTCTTCTGAGTACGATATCTACTATGGCCGCCCAGAAGCAGAAACTCCACTGGATTTAAAGGTGGAGAAATCTTTAGCACCATGTTCAACCATTCAGCTTGCAGTAGAAGGAGTCTCTGGTGACGACCCGTTTCAATTTCTAACTAGTAGTATCGATATTGAAGTAGAGTTATCAGATGAATGTGAAAGGTGTCTTGGAGATGGAAAGGGCCAGTGTTTACCTGACGGTAAAGGAAATTTCTATTGCCCCACAGCTGTTTTATTGCTAGCTTTTTTGGTCAAGATCTGCTATCCAAGATGGAAGAATCAAAGTTCAATCAATCAACGGATTGAGGTCTTTCTGAAAAAACACGGAACCCTTCAGACTAAGAGGTATGGTTATTCTGAGATAAAGAAAGTGACCAACTGTCTCAGAAACAAATTAGGCCAAGAAGGATTCGGTTGTGTATACAAGGGAAAATTACAGGATGGACGTTACGTTGCAGTGAAGATCCTAAACGAATCAGAAGATGATGGTGAGGAATTCATCAATGAAGTCGCTAGTATTAGCAGAACTTCTCATATTAACATTGTTACTCTTTTGGGGTTCTGTTGCGAAGGTTCTAGACGAGCTTTGGTTTATGAGTTCATGCCAAATGGATCACTTGAAAAATTTATCTTTGAAGAAAATGCCCAAATGACAGATCATCGATTGGACTATCAATTGTTGTATCAAATTGTACTCTGTGTTGCTCGAGGACTAGAGTACCTGCATAAAGGCTGCAATATTAAAATTTTACACTTTGACATTAAACCTCATAACATTCTGTTGGATGAGAATTTCAATCCCAAGATTTCAGATTTTGGTCTAGCAAAAATTTGCACCAGAAAAGAGAGTATGGTTTCAATATATGGTGCTAGAGGAACAGCAGGCTACATAGCTCCAGAAGTTTTCTCCAGAAATTTTGGTGTAGTATCACATAAATCAGATGTTTACAGTTATGGAATGATGGTTTTAGAAATGATTGGAGGAAGAAAGAATACTATGACTGGCCTAGACCCCTCAAGCGAAATTTACTTTCCCGATTGGATATACAATCGTCTTGAATCAAACCAGGAACTTGGTTTACAACACATACGAAATACAAGTGATGAAAAAATGGTTAGAAAGATGACAATTGTGGGCTTATGGTGCATACAGACTCATCCTTCAAGTCGACCTGCCATAAGTAAAGTGTTAGAAATGCTAGAAAGCAAAGTTGAGTTACTGCAAATTCCACCTAAACCTTTCTTGTGTTCTCCTTCAACCTCTCCCATCCATTTCTCAAGTGAGACATCGTAA 1800 0.3917 MAPLVFKSLIIYFSQLLLLVSAENGECPRSFQCGFLGQIRFPFTTTQQQHCGLLPIHGCENHDPMAPKTLQLNTSTSTSTSTSTSYPVLKVEVPHTIFITDVEHEKHLLNRSCNAFSKNFSLPHPSPSASFRHKYSITIFRCPHSLKPTLPKYFHKYSNCSSEYDIYYGRPEAETPLDLKVEKSLAPCSTIQLAVEGVSGDDPFQFLTSSIDIEVELSDECERCLGDGKGQCLPDGKGNFYCPTAVLLLAFLVKICYPRWKNQSSINQRIEVFLKKHGTLQTKRYGYSEIKKVTNCLRNKLGQEGFGCVYKGKLQDGRYVAVKILNESEDDGEEFINEVASISRTSHINIVTLLGFCCEGSRRALVYEFMPNGSLEKFIFEENAQMTDHRLDYQLLYQIVLCVARGLEYLHKGCNIKILHFDIKPHNILLDENFNPKISDFGLAKICTRKESMVSIYGARGTAGYIAPEVFSRNFGVVSHKSDVYSYGMMVLEMIGGRKNTMTGLDPSSEIYFPDWIYNRLESNQELGLQHIRNTSDEKMVRKMTIVGLWCIQTHPSSRPAISKVLEMLESKVELLQIPPKPFLCSPSTSPIHFSSETS 599
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01413 599 Gene3D Transferase(Phosphotransferase) domain 1 370 583 - -
Spst10g01413 599 ProSiteProfiles Protein kinase domain profile. 295 584 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01413 599 Gene3D Phosphorylase Kinase; domain 1 270 369 - -
Spst10g01413 599 FunFam S-receptor-like serine/threonine-protein kinase 262 369 - -
Spst10g01413 599 FunFam PR5-like receptor kinase 370 581 - -
Spst10g01413 599 PANTHER RUST RESISTANCE KINASE LR10-RELATED 267 588 IPR045874 GO:0004672
Spst10g01413 599 SMART serkin_6 295 569 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01413 599 Pfam Protein kinase domain 299 567 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01413 599 ProSitePatterns Serine/Threonine protein kinases active-site signature. 418 430 IPR008271 GO:0004672|GO:0006468
Spst10g01413 599 SUPERFAMILY Protein kinase-like (PK-like) 278 570 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01413 Spst-Chr10 14645213 14648244 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01413 245 584 Receptor kinase-like Gene Family AT4G18250 53.448 1.39e-120 370
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst10g01413 Pkinase 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01413 - - gmx:100786495 705.286