Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01412 ATGAGTCCAGTTTACGAATTTGTGTTACTGCTTTTGTTTTCTAACCTTTTGCCACTTCTCTTGGCTGCTGGGTTCCCACGAGAGTGTCCCCCATCATTTCCTTGCGGATATCTTGGCGACGTCAGTTTCCCTTTTACTAAAGCAGAACGCCAGGACTGTGGCTTCTTGCCCATACGAAATTGTGATGATCCACTTAGCCACAAAATGATCCAACCACAGAAAAATGGTACATGGTTTCAGGTTATACGTGTAACTCAGCTTCTGAGTAATCCTACTACTCCTTTCACAACTTTTCAATTTAGAGACGAAGATCTCTATGCCCTTCTGCAGAACCAAAGTTGTGAAGCTTTCAGAAGCAATTATACTCTTCCTCATACCTCTCCCTTTGCTTCTTTTAGTTTCGCATTCACCACAACTCTGGTCAGGTGCAACCGCAGCCTCCCATTCAACCCTCCCACCAACATGTGTAACTATACAAAGTGCCATGACTACAACCTCTACTTCGGCTACAATCACTCGAGTTCTTTGACAGCATGCACAGAGGTCGAGCTTCCAAATAAGGACGTGCCTGACGGTATCAACCCATTTGCATTCCTCACTGCCGATGTACTGATTAAAGTAGAATTAACTAATGAATGTTTAGATTGCATCAATCGCCAACGAGGGCTCTGTCAACTTGACAGCAGAGAGAGATTTTATTGTGCCAAAAGTTACGCTTCGACCTTGTTGGCTGCTGGACTTGTAGTGCTGCTGGTTTTGGTTTGCTGCTTCTGGAGAAAGATCTTTTATCCTGTGTTTTGGAGGGAAAATCCAACTCATCGCATTATTGAGAACTTTTTGAAGGAACATGGACCTCTTCCTACAGCCAGGTACAGTTTTTTAGAGGTTCAGAAAATGACCAACTCTTTTAGAAACAAATTAGGCCAAGGGGGATTCGGTAGCGTATACAAAGGGAAATTACCTGATGGAAGTGTTGTTGCAGTGAAAATTTTAAGTATATCTAAAGGCAATGGAGAAGAATTCATCAATGAAGTTTGGAGCATTAGTAAAACTTCACATGTTAATGTTATTAGACTTTTGGGATTTTGTTTCGAAAATTCACGCCGGGCTCTGATATATGAGTTTATGCCTAATGGATCTCTTGACAAGTTCATCTATGAAGAGAAAAATGAATTAAACGATGTTCATCAACTGGATTGGAAAATATTGAATGATATTGCTATGGGCATTGCTCATGGATTAGAGTACTTGTATAGAGGTTGCAACACTAGAATTATACATTTTGACATAAAACCTCACAACATATTACTAGACGAAGATTTCTGTCCAAAAATATCAGATTTTGGACTTGCAAAGATATGTGCTAGAAAAGAAAGCCTGGTATCCATATTTGGTGCCAGAGGAACTGCAGGGTACGTTGCCCCAGAAGTTTTTTCTAGAAACTTTGGTGTTGTGTCACACAAGTCAGATGTTTATAGTTATGGAATGATGGTGTTAGAAATGGTTGGAAGAAGAAAGAATGTTAACACTGACGTAGACCGGTCGAGTGAAATATATTTTCCTCATTGGATTTACAATCGTCTTGAAGGAAATACTGAGCTTGGTTTAGAAAATATAAGAAATGAAAATGAGGAGCAAATGGTGAGAAAGATGACAATAGTGGGCTTGTGGTGCATACAAACTCTTCCTTCAACTCGACCAACCATAAGTAGAGTGTTTTTGAGAACGAAAAAACAGTTTTTCGAGGAATTGGATATTATCAATGGTGGTCTTCAAATCAAATAA 1785 0.3972 MSPVYEFVLLLLFSNLLPLLLAAGFPRECPPSFPCGYLGDVSFPFTKAERQDCGFLPIRNCDDPLSHKMIQPQKNGTWFQVIRVTQLLSNPTTPFTTFQFRDEDLYALLQNQSCEAFRSNYTLPHTSPFASFSFAFTTTLVRCNRSLPFNPPTNMCNYTKCHDYNLYFGYNHSSSLTACTEVELPNKDVPDGINPFAFLTADVLIKVELTNECLDCINRQRGLCQLDSRERFYCAKSYASTLLAAGLVVLLVLVCCFWRKIFYPVFWRENPTHRIIENFLKEHGPLPTARYSFLEVQKMTNSFRNKLGQGGFGSVYKGKLPDGSVVAVKILSISKGNGEEFINEVWSISKTSHVNVIRLLGFCFENSRRALIYEFMPNGSLDKFIYEEKNELNDVHQLDWKILNDIAMGIAHGLEYLYRGCNTRIIHFDIKPHNILLDEDFCPKISDFGLAKICARKESLVSIFGARGTAGYVAPEVFSRNFGVVSHKSDVYSYGMMVLEMVGRRKNVNTDVDRSSEIYFPHWIYNRLEGNTELGLENIRNENEEQMVRKMTIVGLWCIQTLPSTRPTISRVFLRTKKQFFEELDIINGGLQIK 594
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01412 594 SMART serkin_6 301 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01412 594 PANTHER RUST RESISTANCE KINASE LR10-RELATED 268 573 IPR045874 GO:0004672
Spst10g01412 594 ProSiteProfiles Protein kinase domain profile. 301 581 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01412 594 ProSitePatterns Serine/Threonine protein kinases active-site signature. 425 437 IPR008271 GO:0004672|GO:0006468
Spst10g01412 594 FunFam PR5-like receptor kinase 376 583 - -
Spst10g01412 594 SUPERFAMILY Protein kinase-like (PK-like) 283 573 IPR011009 -
Spst10g01412 594 FunFam serine/threonine-protein kinase PBS1-like 275 375 - -
Spst10g01412 594 ProSitePatterns Protein kinases ATP-binding region signature. 307 329 IPR017441 GO:0005524
Spst10g01412 594 Gene3D Transferase(Phosphotransferase) domain 1 376 585 - -
Spst10g01412 594 Pfam Protein kinase domain 305 572 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01412 594 Gene3D Phosphorylase Kinase; domain 1 271 375 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01412 Spst-Chr10 14634413 14638570 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01412 290 586 Receptor kinase-like Gene Family AT4G18250 57.895 1.44e-115 357
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRK10L-2 Spst10g01412 Pkinase 3.4e-43 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01412 - - gmx:100783861 806.208