Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01411 ATGTCTCCGGTTTTGTTTTCTCTTCTAACTGTGTTGCTTCTCTCAGCTGGGAATGCAAACGGGCACCACTCTGATTGTCCAGACTCATTTGATTGCGGAAGTGTGGGGACAATTTCCTTTCCCTTCACCACCTTTGAGCACCAGAATTGTGGTGTTTTGGCAATTCATGGCTGCAATCAATCCAACCAAACGGCACCCAAGTATGTCCAGTTGACCAATGGAGGGAAAAAATTTCAAGTTACAAAACTTAATATTCATCGTTCGGGGCTCACTGATATTTCCATTATCGATGAGAATTTCAGAAAGCTTCTAGAACACTCTATTTGTAATGCCTTGAGCTATAATATCACCCTCCCTCCCTCCTCTCCTTTCGGTTATTTTTATCTGCAAAACAACGTAACCTCCTTCAATTGCAGCCGCCAACAAACACTTAACGTTTCTAATAATTTCATCAACTATACGCTATGTCCTTCTGATTTTTACTTTGTCCCTTCATCCTCTGATGATGATGGGTATCTGCGCTCCTTAACCCCCTCCTGTTCAATGGTTCAACTTCCCCTGAGACAAAATTCTCAGTTCTTCAAAGATCAATTGGGATTCTTAACTCCTCAAATTACTTTTCAATTCGTGTTTTCAATTACCTGTCAACAGTGTCATCGAGGTGGGGGCAGTTGCCGACCTGACAGCAGCGGAAATTCATATTGCGCCATGAGGAAAAGTAGAGTTTCGACTCGGAAGCTTGAATTGATCCTAGTCGCAATCTTTGAAGGCATTGGTGTTGGACCATTGATCATGTTTGGGTTGTTCCTCGTGTTACGCCACTGCAAACGTCAATATGGTCAATCGAGTAACACTATCGATTCCTTCCCAAATCCTGACACGGAGAGTGAAAGGATCTTCTTTGGGGTACCCGTCTTCTCCTATAAGGAACTTCAAGAGGCAACCAACAATTTTGATCCCACTAGACAGCTAGGAGATGGAGGCTTTGGCATTGTTTACTACGGGACATTGAGAGATGGAAGGGAAGTTGCAATCAAGCATCTATTTGAGCACAATTACAAGAGAGTGGAACAGTTTATGAATGAAATTGAGATCCTTACTCGTTTACGCCACAGAAATCTTGTGTCCCTTTATGGCTGCACTTCACGTCACGGCCATGAGCTACTGCTTGTGTATGAATACATTCCAAATGGCACAGTTGCTAGCCATCTCCACGGTGATTTAGCAAGGGTTGGTTTGCTGACATGGCCTATTCGAATGCAAATTGCCATAGACACTGCTACTGCATTGGCCTATCTCCATGCTTCTAACATCATTCACCGTGATGTGAAGACCAATAACATTCTACTTGATATTAATTTTTCGGTTAAGGTAGCAGATTTTGGGCTTTCAAGATTGTTCCCCAGTGATGCAAGTCACGTGTCCACAGCTCCACAAGGGTCTCCGGGGTATCTTGATCCTGAATACTTCCAATGCTATAGGCTCACTGAAAAGAGTGATGTGTATAGCTTTGGGGTTGTGCTCATGGAACTAATATCATCCATGCCAGCAGTTGATGGAGCCAGGGAAAGAGATGAAGTTAACTTAGCAAATTTTTGCATGAAAATGATCCAAAGAGGAAAGCTTAGTGAGCTTGTTGACAGATCTTTTGGGTTTGAGTCAGACCAAGTAGTCAACAGGATGGTGACTTCAGTGGCAGAGTTGGCCTTTCGGTGTGTGCAAGGAGACAACGAATTAAGGCCTTCTATGGATCAAGTGCTGGAATTCCTCAAGAAAATTCAAAGTGGAAATTATGAGTCTGAGAATCTAGAGAAAGGAGATGATGGTGATGATGTTATCTCGTCTACATCCAGCGAAGAAATGCAACCACCACCAGCAGCTTCACGAGACTCAAGTGAAATTGGAATTTTAATGAATAAAAAGCCAGCAGCTTCGTCCAAGTCCTTCAATGAGAGTATGTTTGGTATACAGGAAATAAAAAGAGAGGATGAAAATAGAGAAGAAATCAAGTTGGAAAAAGAAAAATATAGCAGAGAACAGAGTGAGGAAGAGGGGAGAAATAACTCAGGAGATGGCAGCATTGCAGAAGTTCAAGCTGTTCACAACGCCATGCGGAGTGGGGCAAAGCCCAACCCAAAGCCCGAGAACGAGCCCGTTGGTTCAGTTCCGCAGGCCCAAAACATCTCTGCTTACCCTTCTTAG 2202 0.4332 MSPVLFSLLTVLLLSAGNANGHHSDCPDSFDCGSVGTISFPFTTFEHQNCGVLAIHGCNQSNQTAPKYVQLTNGGKKFQVTKLNIHRSGLTDISIIDENFRKLLEHSICNALSYNITLPPSSPFGYFYLQNNVTSFNCSRQQTLNVSNNFINYTLCPSDFYFVPSSSDDDGYLRSLTPSCSMVQLPLRQNSQFFKDQLGFLTPQITFQFVFSITCQQCHRGGGSCRPDSSGNSYCAMRKSRVSTRKLELILVAIFEGIGVGPLIMFGLFLVLRHCKRQYGQSSNTIDSFPNPDTESERIFFGVPVFSYKELQEATNNFDPTRQLGDGGFGIVYYGTLRDGREVAIKHLFEHNYKRVEQFMNEIEILTRLRHRNLVSLYGCTSRHGHELLLVYEYIPNGTVASHLHGDLARVGLLTWPIRMQIAIDTATALAYLHASNIIHRDVKTNNILLDINFSVKVADFGLSRLFPSDASHVSTAPQGSPGYLDPEYFQCYRLTEKSDVYSFGVVLMELISSMPAVDGARERDEVNLANFCMKMIQRGKLSELVDRSFGFESDQVVNRMVTSVAELAFRCVQGDNELRPSMDQVLEFLKKIQSGNYESENLEKGDDGDDVISSTSSEEMQPPPAASRDSSEIGILMNKKPAASSKSFNESMFGIQEIKREDENREEIKLEKEKYSREQSEEEGRNNSGDGSIAEVQAVHNAMRSGAKPNPKPENEPVGSVPQAQNISAYPS 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01411 733 Gene3D Phosphorylase Kinase; domain 1 291 394 - -
Spst10g01411 733 FunFam Wall-associated receptor kinase-like 20 395 603 - -
Spst10g01411 733 MobiDBLite consensus disorder prediction 660 733 - -
Spst10g01411 733 ProSitePatterns Protein kinases ATP-binding region signature. 324 346 IPR017441 GO:0005524
Spst10g01411 733 FunFam receptor-like protein kinase FERONIA 283 394 - -
Spst10g01411 733 Gene3D Transferase(Phosphotransferase) domain 1 395 605 - -
Spst10g01411 733 ProSiteProfiles Protein kinase domain profile. 318 593 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01411 733 CDD STKc_IRAK 324 593 - -
Spst10g01411 733 MobiDBLite consensus disorder prediction 660 686 - -
Spst10g01411 733 Coils Coil 659 686 - -
Spst10g01411 733 MobiDBLite consensus disorder prediction 599 635 - -
Spst10g01411 733 SUPERFAMILY Protein kinase-like (PK-like) 301 596 IPR011009 -
Spst10g01411 733 SMART serkin_6 318 590 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01411 733 Pfam Protein tyrosine and serine/threonine kinase 321 590 IPR001245 GO:0004672|GO:0006468
Spst10g01411 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 438 450 IPR008271 GO:0004672|GO:0006468
Spst10g01411 733 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 4 631 IPR044652 GO:0004672
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01411 Spst-Chr10 14614173 14618205 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01411 26 595 Receptor kinase-like Gene Family AT1G25390 46.154 3.19e-150 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst10g01411 PK_Tyr_Ser-Thr 3e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01411 - - gmx:100778085 930.628