Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01410 ATGCCACTTCTCTTGGCTGCTGGGTTCCCACGAAAGTGTCCCCCATCATTTCCTTGCGGATATCTTGGCGACGTCAGTTTCCCTTTTACTAAAGCAGAACGCCAGGACTGTGGCTTCTTGCCCATACGAAATTGTGATGATCCACTTAACCACAAAATGATCCAACCACAGAAAAATGGTACATGGTTTCAGGTTATACGTGTAACTCAGCTTCTGAGTAATCCTACTACTCCTTTCACAACTTTTCAATTTAGAGACGAAGATCTCTATGCCCTTCTGCAGAACCAAAGTTGTGAAGCTTTCAGAAGCAATTATACTCTTCCTCATACCTCTCCCTTTGCTTCTTTTAGTTTCGCATTCACCACAACTCTGTTCAGGTGCAACCGCAGCCTCCCATTCAACCCTCCCACCAACATGTGTAACTATACAAAGTGCCATGACTACAACCTCTACTTCGGCTACAATCACTCGAGTTCTTTGACAGCATGCACAGAGGTCAAGCTTCCAAATAAGGACGTGCCTGACGGTATCAACCCATTTGCATTCCTCACTGCCGATGTACTGATTAAAGTAGAATTAACTCATGAATGTTTAGATTGCATCAATCGCCAACGAGGGCTCTGTCAACTTGACAGCACAGAGAAATTTTGTTGTGCCAACAAGGGTGGACAATTGGAGTCAAGAGATTCTTATTCTGATTCCTCCTCGAATCCTCATAGAACAAGTAGTGGCGAATACTTTGAAGTTCCACTCTTCTCCTACGCGCAGCTTAAAGAAGTCACGAACAATTTCGACCATACTCAGGAACTTGGAGATGGAGGCTTCGGTACTGTCTACTATGGGAAACTCCCAGATGGAAGGGAAGTTGCGGTGAAGCGCTTATACGAGCACAACTGGAGGCGAGTAGAACAGTTCAAGAACGAAGTTAAAATCCTCACACGTTTGCGTCACAAAAATCTAGTGTCACTCTATGGCTGCACTTCACGTCACAGCCGTGAACTCCTACTTGTGTACGAATACATTTCAAACGGGACTGTAGCATGTCATCTCCACGGTGATTTAGCCAAGCCTGGCTTGTTACCATGGCCTACACGTATCAAAATTGCCATAGAAACTGCTAGTGCATTGGCTTATCTTCATGCCTCACGCATCATCCACCGGGACGTGAAAACAAACAACATTCTCCTGGACAGCAACTTTTCTGTTAAGGTAGCAGATTTTGGGCTTTCAAGAGACTTCCGGAACGATGTCACACATGTCTCCACAGCTCCACAAGGGTCCCCGGGCTACCTTGACCCTGAATATTACAGCTGCTACCAGCTTACTAGTAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTTATTGAGCTGATATCATCCAAGCCTGCAGTTGATATGAACAGAAGCAGGGATGAGATTAACTTGTCAAATCTAGCAGTGAGGAAGATTCAAGAAAGTGCAATTGGTGATCTTGTTGATCCTTGTCTTGGTTTTGATTCGGACAGTGGGGTTAAGGGGATGATAGTCTCAGTGGCAGGGTTGGCTTTACAGTGTTTGCAGAGGGAAAAGGACTTGAGACCTTCTATGGATGAGGTGTTGCATGAACTGCAGAGGATTAAGAGTGGGAAGGATGAGGTAGATGTTGATAATGTTAGAGTTTCAGATAGTTGTGCACATTCACCACCACCAGCCTCACCAGAGTGGGATGAAGTTGGATTGTTGAAGAATACAAAGCCTGCTTCACCAAACAGTGTGACTGATAAATGGGAAAGCATCACTCAGCAGGATGCGATTTCAATTTCGGATGAAGATTTTCACAAGCGTTTCCAGAACAACAGTTGTGACACTTTGACCAATAACTACAGTCTTCCATCCCATTCTCAGTTATATTCTATTAATATAAAATATAATGTAACACTGTTCCGATGCAAACACGGCTTCAATAAGAAACCTCCACCACATTATTTTAGTTACCCCTGCCCTCAGTATCATTATGATATCTATTATGACAGCCTTCCCCTTCCTAACTATGAGGAGACTCGTACCCTTTTCTCCTCCTGCTCAGTTCTTCAGTTAGCAAAAAAAGACAAGACTGATACCAAAGACATTCTATCGTTTGTATCAGCTGCGATGGTTATTGAAGTAGTATTATCTAATGATTGTTATGAGTGCTACAATCGCAGAGGAGGCCAATGTCGCCTTGACAACGATCAAAAGTTCTACTGTCAGCAAGGGCCAAGGAACAGGAGTAAAATTTTGAAGCTGATACTTGGACTTGTAGCAGACCCCCAATACCAATCAAGAAACACACAGAGAGGTGAAATTGGTCCCATCTCAAATCCAGAGCCCGAAAATGGCAGGTTCTACTATGAAGTCCCTCTCTTCTCTTACAAGGAGCTTAAAGAAGCTACATACAATTTCCACCACGCCAGACAACTTGGAAGTGGAGGCTTTGGAACCGTTTATTACGGAAAACTGAGAGATGGACGAGAAGTTGCTATCAAGCGTCTCTATGAGCACAACTACAGGCGAGTAGAACAGTTCATGAACGAAGTTCACATCCTCACTGGCTTGCGCCACATAAATCTTGTGTCCCTCTACGGTTGCACTTCAGGTCGCAGTCGTGAACTACTGCTTGTGTACGAACACGTTCCAAATGGCACTGTTGCATGCCACCTCCACGGTGCTTTTGCAAGGCCACGCACTCTTCCATGGCAAATAAGAATGAAAATTGCCATAGAGACCGCGAGTGCATTGTCTTATCTCCATGCTTCTGCCATCATCCACCGTGATGTTAAAACCAAAAACATTCTCCTTACTCAAAGTTTTAGTGTTAAGGTTGGTGACTTTGGTCTTTCAAGGCTGTTCCCAAACGATGTCACGCATGTCTCCACTGCCCCTCTGGGGACTCCAGGTTACGTTGACCCGGAATATCAGCAGTGCTACCAGCTTACAAACAAGAGTGATGTGTATAGTTTCGGGGTTGTGCTAATTGAGCTGATATCTTCTAAGCCAGCTGTTGATATGAGCAGGAATAGGGATGAGATAAACTTGTCTAACTTAGCAATAAAGAAGATTCAGCAGAGTGCATTTAGTGAGCTGGTTGATTCTTCTCTTGGTTTTGATTCAGACAGTGAGGTAAAGAGGATGATGGTTTCAGTGGCAGAATTGGCCTTTCAGTGTTTGCAACGGGATAAAGATTTGAGACCCTCTATGGATGAGGTTTTGAAGATGCTTACGAGAATTGAAAGTGGGAAGGATACGCCTGAGCATCTGGATGAAGAAGATTTATCTCTACCCTCTCTACCTTCACCACCACCACTAGATTGGGATGAGAATGGATTGTGGAAAAAAATGATGGTGCAACCTTCACCTAAAGCCGTCACTGATAAATGGCACAAATTGGTTGTTTATTGGATAGAGGGGATCTCAATTAATCGTCCCTCCAAATTAAAATCTTACTGTATGAAAATGAAAATATACAGTCATTTTCGAAGTCAAGTGACGTATGAAGCCCTTCAAAACGACAATATGTTTTTTTGTGTTCAGTCTGAAAAACAAGTTGCAGCACACTTTGACTGTGGGCTTCTGCTTCTTGTTTCAGCTGAGAATGGAGAGTGTCCGCGATCTTTCCAATGTGGATTTCTTGGCCAGATTCGGTTTCCTTTCACAACCACTCAGCAACAACACTGCGGCTTATTGCCTATACATGGCTGCGAAAATCATGACCCAATGGCTCCCAAAACCCTCCAACTAAACACCTCAACAACAACATCAACATCGTACCCTGTTCTGAAGGTAGAAGTACCTCATACCATATTTATCACGGATGTTGAACATGAAAAACATTTACTAAATAGAAGTTGCAAAGCATTCGGCAAGAATTTTAGTCTTCCTCACCCCTCTCCTTCAGCTTCTTTCCTGCTCAAATATAGTATCACTATCTTCAGATGCCCTCACTCCCTCAAACCCACCCTTCCCAAATATTTTCATAAATATTCAAACTGTTCTTCTGAGTACGATATCTACTATGGCCGCCCAGATGCAGAAACTCCTCTGGATTTAAAGGTGGAGAAATCTTTAGCACCATGTTCAACCATTCAGCTTGCAGTAGAAGGAGTCTCTGGTGACGACCCGTTTCAATTTCTAACTAGTAGTATCGCTATTGAAGTAGAGTTATCAGATGAATGTGAAAGGTGTCCTGGAGATGGAAAGGGCCAGTGTTTACCTGACGGTAAAGGAAATTTCTCTTGCCCCACAGAAAGTGCGAATATCTACTTTGGGGTTCCTGTCTTCACCTATAGGGATCTTGAAATAGCAACAAAAAGTTTCGATCGCTCAAGAGAACTAGGAGAAGGAGGCTTTGGTATTGTCTACTTTGGAAAACTCCAGGATGGACGTGAAGTCGCTGTGAAGCGCCTATACGAGCACAACTACAGGAGAGTAGAACAGTTCTTGAATGAAATCAAGATTCTTACACGCTTGCGCCACAAAAACTTAGTGTCTCTCTATGGCTGCACTTCACGAGACAGCCGTGAACTACTGCTTGTTTATGAATACATTTCAAATGGAACTGTGGCCAGTCACCTCCATCATCATGAATCAACAAATCATGGCTCTATGACATGGCCTACCCGAATGAAAGTGGCCATTGAGACTGCTACTGCGTTGGCCCATCTCCATGCTCGTGACATCATTCACCGTGATGTCAAAACCAGCAACCTTCTGCTTGACAGCACTTTCTGTGTTAAGGTAGCAGATTTTGGATTGTCAAGACTGTTCCCAATTGACGTCACCCATGTTTCCACTGCTCCACAAGGCACCCCTGGCTATGTTGATCCTGAATATCACCGATGTTACCAACTTACCAACAAGAGTGATGTGTATAGTTTTGGGGTTGTGCTCATCGAGCTAATATCATCCATGCCAGCAATTGATCTGAACCGGCATAAGGATGAAATAAACTTGGCAGATCTAGCCATGAGGAAGATTCATAAAAATGCAATTGCTGAACTGGTGGATCCTTCCCTTGGTTTTGAGTCAAATGATGATGTTAAAAGGCAAATAACTGCAGTAGCAGAATTGGCTTTCCAGTGCTTGCAACGGGACAAAGAATTGAGACCCTCCATGGAGGAAGTGTTGGAGGTGCTGAAGAGAATTGAAAGCGGGAAGGAGGAGACAAGGCATGTAGAAGAAGTGAACCTTGAGGATGAAGAGCCACCATCACCATCTTCAGCAGATCATGATGAAGTGAAATTGTTGATGAATATCAAGTTGCCACCTTCTTCGCCAAAGGCTGTGACGGATAAATGGAGCAGTCAATCTACTAGTCCTAATGTCAGTGGTCAATAA 5352 0.4372 MPLLLAAGFPRKCPPSFPCGYLGDVSFPFTKAERQDCGFLPIRNCDDPLNHKMIQPQKNGTWFQVIRVTQLLSNPTTPFTTFQFRDEDLYALLQNQSCEAFRSNYTLPHTSPFASFSFAFTTTLFRCNRSLPFNPPTNMCNYTKCHDYNLYFGYNHSSSLTACTEVKLPNKDVPDGINPFAFLTADVLIKVELTHECLDCINRQRGLCQLDSTEKFCCANKGGQLESRDSYSDSSSNPHRTSSGEYFEVPLFSYAQLKEVTNNFDHTQELGDGGFGTVYYGKLPDGREVAVKRLYEHNWRRVEQFKNEVKILTRLRHKNLVSLYGCTSRHSRELLLVYEYISNGTVACHLHGDLAKPGLLPWPTRIKIAIETASALAYLHASRIIHRDVKTNNILLDSNFSVKVADFGLSRDFRNDVTHVSTAPQGSPGYLDPEYYSCYQLTSKSDVYSFGVVLIELISSKPAVDMNRSRDEINLSNLAVRKIQESAIGDLVDPCLGFDSDSGVKGMIVSVAGLALQCLQREKDLRPSMDEVLHELQRIKSGKDEVDVDNVRVSDSCAHSPPPASPEWDEVGLLKNTKPASPNSVTDKWESITQQDAISISDEDFHKRFQNNSCDTLTNNYSLPSHSQLYSINIKYNVTLFRCKHGFNKKPPPHYFSYPCPQYHYDIYYDSLPLPNYEETRTLFSSCSVLQLAKKDKTDTKDILSFVSAAMVIEVVLSNDCYECYNRRGGQCRLDNDQKFYCQQGPRNRSKILKLILGLVADPQYQSRNTQRGEIGPISNPEPENGRFYYEVPLFSYKELKEATYNFHHARQLGSGGFGTVYYGKLRDGREVAIKRLYEHNYRRVEQFMNEVHILTGLRHINLVSLYGCTSGRSRELLLVYEHVPNGTVACHLHGAFARPRTLPWQIRMKIAIETASALSYLHASAIIHRDVKTKNILLTQSFSVKVGDFGLSRLFPNDVTHVSTAPLGTPGYVDPEYQQCYQLTNKSDVYSFGVVLIELISSKPAVDMSRNRDEINLSNLAIKKIQQSAFSELVDSSLGFDSDSEVKRMMVSVAELAFQCLQRDKDLRPSMDEVLKMLTRIESGKDTPEHLDEEDLSLPSLPSPPPLDWDENGLWKKMMVQPSPKAVTDKWHKLVVYWIEGISINRPSKLKSYCMKMKIYSHFRSQVTYEALQNDNMFFCVQSEKQVAAHFDCGLLLLVSAENGECPRSFQCGFLGQIRFPFTTTQQQHCGLLPIHGCENHDPMAPKTLQLNTSTTTSTSYPVLKVEVPHTIFITDVEHEKHLLNRSCKAFGKNFSLPHPSPSASFLLKYSITIFRCPHSLKPTLPKYFHKYSNCSSEYDIYYGRPDAETPLDLKVEKSLAPCSTIQLAVEGVSGDDPFQFLTSSIAIEVELSDECERCPGDGKGQCLPDGKGNFSCPTESANIYFGVPVFTYRDLEIATKSFDRSRELGEGGFGIVYFGKLQDGREVAVKRLYEHNYRRVEQFLNEIKILTRLRHKNLVSLYGCTSRDSRELLLVYEYISNGTVASHLHHHESTNHGSMTWPTRMKVAIETATALAHLHARDIIHRDVKTSNLLLDSTFCVKVADFGLSRLFPIDVTHVSTAPQGTPGYVDPEYHRCYQLTNKSDVYSFGVVLIELISSMPAIDLNRHKDEINLADLAMRKIHKNAIAELVDPSLGFESNDDVKRQITAVAELAFQCLQRDKELRPSMEEVLEVLKRIESGKEETRHVEEVNLEDEEPPSPSSADHDEVKLLMNIKLPPSSPKAVTDKWSSQSTSPNVSGQ 1783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01410 1783 FunFam Wall-associated receptor kinase-like 20 341 548 - -
Spst10g01410 1783 CDD STKc_IRAK 270 539 - -
Spst10g01410 1783 Gene3D Phosphorylase Kinase; domain 1 1420 1520 - -
Spst10g01410 1783 Gene3D Phosphorylase Kinase; domain 1 235 340 - -
Spst10g01410 1783 Gene3D Phosphorylase Kinase; domain 1 782 883 - -
Spst10g01410 1783 ProSitePatterns Protein kinases ATP-binding region signature. 270 292 IPR017441 GO:0005524
Spst10g01410 1783 MobiDBLite consensus disorder prediction 1766 1783 - -
Spst10g01410 1783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 927 939 IPR008271 GO:0004672|GO:0006468
Spst10g01410 1783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 384 396 IPR008271 GO:0004672|GO:0006468
Spst10g01410 1783 SMART serkin_6 1444 1720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 SMART serkin_6 807 1079 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 SMART serkin_6 264 539 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 MobiDBLite consensus disorder prediction 1728 1783 - -
Spst10g01410 1783 SUPERFAMILY Protein kinase-like (PK-like) 1425 1720 IPR011009 -
Spst10g01410 1783 SUPERFAMILY Protein kinase-like (PK-like) 782 1088 IPR011009 -
Spst10g01410 1783 FunFam Wall-associated receptor kinase-like 20 1521 1730 - -
Spst10g01410 1783 SUPERFAMILY Protein kinase-like (PK-like) 238 536 IPR011009 -
Spst10g01410 1783 MobiDBLite consensus disorder prediction 1728 1754 - -
Spst10g01410 1783 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1565 1577 IPR008271 GO:0004672|GO:0006468
Spst10g01410 1783 Pfam Protein kinase domain 266 534 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 Pfam Protein kinase domain 1445 1715 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 Pfam Protein kinase domain 807 1077 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 Gene3D Transferase(Phosphotransferase) domain 1 341 553 - -
Spst10g01410 1783 Gene3D Transferase(Phosphotransferase) domain 1 884 1094 - -
Spst10g01410 1783 ProSiteProfiles Protein kinase domain profile. 264 537 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 ProSitePatterns Protein kinases ATP-binding region signature. 813 835 IPR017441 GO:0005524
Spst10g01410 1783 ProSiteProfiles Protein kinase domain profile. 1444 1720 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 Gene3D Transferase(Phosphotransferase) domain 1 1521 1739 - -
Spst10g01410 1783 ProSiteProfiles Protein kinase domain profile. 807 1082 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01410 1783 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 1416 1520 - -
Spst10g01410 1783 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 12 593 IPR044652 GO:0004672
Spst10g01410 1783 FunFam probable LRR receptor-like serine/threonine-protein kinase At1g53430 234 340 - -
Spst10g01410 1783 CDD STKc_IRAK 1450 1720 - -
Spst10g01410 1783 FunFam Wall-associated receptor kinase-like 20 884 1091 - -
Spst10g01410 1783 ProSitePatterns Protein kinases ATP-binding region signature. 1450 1472 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01410 Spst-Chr10 14594761 14609321 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01410 17 591 Receptor kinase-like Gene Family AT1G25390 45.440 6.52e-148 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_WAK_LRK10L-1 Spst10g01410 Pkinase 1.5e-47 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01410 - - gmx:100305407 863.988