Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01400 ATGGTTTCAAGGTCATATTCCAACTTGTTAGATCTTACTTCCTGTGGCTCCCCATCTTTCGGTCGCGAGAAGAAAAGGCTACCTCGAGTTGCAACTGTTGCCGGAGTACTATCTGAACTAGATGATGAGTCCAGCAATAGTGTTGGCTCTGATACTCCATCCTCAGTCTCTCAAGAGAGGATGATCATTGTAGGTAACCAACTTCCATTAAGAGCACGCAGAAAAGACAATGGTACATGGGAGTTTACATGGGATGAGGACTCACTTCTTCTGCAGCTGAAAGATGGTCTTGGGGATGATGTGGAAACTATTTATATTGGTTGTCTTAAAGAAGAGATTGAGCCTAGTGAGCAAGATGATGTTGCTCAGTACTTGCTGGACACTTTCAAATGCGTGCCCACGTTTCTCCCTCCTGAGCTTTTTAGCAAATTCTATCATGGATTCTGCAAACAACACCTATGGCCTTTATTTCACTACATGCTTCCCCTTTCGCCTGATCTTGGTGGTAGATTCGATAGGTCCCTTTGGCAAGCTTATGTTTCTGTGAACAAGATATTTGCGGATAAAGTGATGGAAGTCATTAGCCCTGATGACGACTTTGTGTGGGTTCACGACTACCATCTGATGGTACTTCCAACATTTTTGAGAAAGAGATTTAACAGGGTGAGGCTAGGATTCTTCCTGCACAGTCCATTTCCTTCCTCTGAGATATACCGAACCCTTCCTGTTAGGGACGAACTTCTTAGAGCTCTTCTGAATTCTGACCTTATTGGGTTTCATACTTTTGATTATGCCAGGCATTTCCTCTCCTGCTGCAGTAGAATGCTTGGAATTTCTTACCAATCCAAGCGGGGCTACATTGGTCTTGAGTACTATGGAAGAACTGTAAGCATTAAGATTCTTCCTGTAGGTATTCATATAGGTCAGCTCCAATCAGTCATGAGTCTTCCTGAGACAGAAAGCAAGGTTGCAGAGTTAAAAAAGCAGTTCAGAGATCAAACTGTGCTGCTCGGGGTTGATGACATGGATATCTTCAAAGGAATCAGCTTAAAACTTTTGGCCATGGAGCAATTGCTTTTACAACATCCTGATAAGAGGGGCAGAGTTGTCCTGGTCCAAATTGCAAACCCTGCAAGAGGCCGTGGAAAGGATGTGCAGGAGGTACAAAGTGAAACTTATGCCACGGTGAAGAGGATAAATAATACATTTGGAAGGTCTGGATACACACCTGTAGTCTTGATTGATACACCACTTCAGAGTTACGAGAGAATTGCTTATTATGTGATTGCAGAATGTTGCCTTGTTACAGCAGTGAGAGATGGGATGAACCTTATACCCTATGAATACATCATTTGTAGACAAGGCAGTGAGAAGATAGATGAGATCTTAGGGACAGACCCACTTATTCAAAAGAGAAGTATGCTGGTGGTGTCCGAGTTCATTGGCTGCTCCCCTTCATTGAGTGGGGCAATTCGAGTGAATCCATGGAACATTGATGCTGTTGCTGAAGCTATGGATTCTGCACTGATGGTTCCAGAGGCTGAAAAGCAGATGCGGCATGAGAAACATTATAGGTATGTTAGTACACATGATGTTGCATATTGGGCACGTAGCTTCTTGCAGGATCTGGAGAGGGCATGTAGAGATCATCTAAGGAGACGATGCTGGGGCATTGGTTTTGGTTTAGGCTTCCGAGTAATTGCTTTGGATCCAAACTTTAGAAAGCTATCCGTGGAACATATTGTTTCAGCTTATAAGAGGACCAGGCACCGAGCGATTCTTTTGGATTACGATGGGACTATGGTGCAGCCCGGATCCATGAGTACAACACCTAATGCCGAAGCAGTTGGCATCTTGAACATCTTGTGCAGGGACACCAAGAATTGTGTTTTCATTGTAAGTGGAAGGGAGAGAAGGACTCTTACTGAATGGTTTTCTTCTTGTGAAAGGATGGGAATCGCTGCAGAGCATGGTTATTTTGTGAGGACCAATCAAAATGCCGAATGGGAAACTTGTGTTCCTGTACCGGATTTTGAGTGGAAACAGATTGCTGAGCCAGTTATGCAGTTATATATGGAAACAACTGATGGTTCTAACATAGAGGCCAAAGAAAGTGCTCTTGTTTGGAATTACCAGTATGCAGACCGAGACTTTGGTTCATGCCAAGCTAAGGAGCTTTTTGATCATCTGGAAAGTGTTCTTGCCAATGAGCCTGTCTCTGTTAAAAGTAGTCCAAACATTGTGGAAGTAAAACCTCAGGGTGTGAGTAAGGGTATTGTAGCAGAACGTCTTCTCTCAACAATGAAACAAAAGGGAGTGATTCCAGATTTTGTTCTATGCATAGGAGATGACAGATCAGACGAGGACATGTTTGGGGTAATAATGAATGCCAGGGCATTACTATCTCCAGTTGCTGAAGTGTTTCCTTGCACAGTTGGGCAAAAACCTAGCAAGGCCAAGTATTACTTGGAAGACACAAGTGAGATTTTGAGAATGTTGCAAGGCCTTGCCAATGCTTCTGAGCAGTCTACTAGAACTTCTTCTCTACCTTCTCATTAA 2559 0.4342 MVSRSYSNLLDLTSCGSPSFGREKKRLPRVATVAGVLSELDDESSNSVGSDTPSSVSQERMIIVGNQLPLRARRKDNGTWEFTWDEDSLLLQLKDGLGDDVETIYIGCLKEEIEPSEQDDVAQYLLDTFKCVPTFLPPELFSKFYHGFCKQHLWPLFHYMLPLSPDLGGRFDRSLWQAYVSVNKIFADKVMEVISPDDDFVWVHDYHLMVLPTFLRKRFNRVRLGFFLHSPFPSSEIYRTLPVRDELLRALLNSDLIGFHTFDYARHFLSCCSRMLGISYQSKRGYIGLEYYGRTVSIKILPVGIHIGQLQSVMSLPETESKVAELKKQFRDQTVLLGVDDMDIFKGISLKLLAMEQLLLQHPDKRGRVVLVQIANPARGRGKDVQEVQSETYATVKRINNTFGRSGYTPVVLIDTPLQSYERIAYYVIAECCLVTAVRDGMNLIPYEYIICRQGSEKIDEILGTDPLIQKRSMLVVSEFIGCSPSLSGAIRVNPWNIDAVAEAMDSALMVPEAEKQMRHEKHYRYVSTHDVAYWARSFLQDLERACRDHLRRRCWGIGFGLGFRVIALDPNFRKLSVEHIVSAYKRTRHRAILLDYDGTMVQPGSMSTTPNAEAVGILNILCRDTKNCVFIVSGRERRTLTEWFSSCERMGIAAEHGYFVRTNQNAEWETCVPVPDFEWKQIAEPVMQLYMETTDGSNIEAKESALVWNYQYADRDFGSCQAKELFDHLESVLANEPVSVKSSPNIVEVKPQGVSKGIVAERLLSTMKQKGVIPDFVLCIGDDRSDEDMFGVIMNARALLSPVAEVFPCTVGQKPSKAKYYLEDTSEILRMLQGLANASEQSTRTSSLPSH 852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01400 852 Gene3D - 716 849 IPR023214 -
Spst10g01400 852 Gene3D - 590 705 IPR023214 -
Spst10g01400 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 53 311 - -
Spst10g01400 852 CDD HAD_TPP 592 828 - -
Spst10g01400 852 FunFam Alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 720 848 - -
Spst10g01400 852 NCBIfam trehalose-phosphatase 589 837 IPR003337 GO:0003824|GO:0005992
Spst10g01400 852 SUPERFAMILY HAD-like 591 837 IPR036412 -
Spst10g01400 852 Gene3D Glycogen Phosphorylase B; 312 528 - -
Spst10g01400 852 FunFam Alpha,alpha-trehalose-phosphate synthase 313 528 - -
Spst10g01400 852 Gene3D Glycogen Phosphorylase B; 53 311 - -
Spst10g01400 852 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Spst10g01400 852 Pfam Trehalose-phosphatase 594 827 IPR003337 GO:0003824|GO:0005992
Spst10g01400 852 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Spst10g01400 852 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 548 - -
Spst10g01400 852 NCBIfam HAD-IIB family hydrolase 593 795 IPR006379 -
Spst10g01400 852 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 34 838 IPR001830 GO:0003824|GO:0005992
Spst10g01400 852 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 590 707 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01400 Spst-Chr10 14509142 14512285 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01400 1 851 Trehalose Biosynthesis Gene Families AT4G17770 78.438 0.0 1427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01400 K16055 - gmx:100782799 1657.88