Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01398 ATGTTCCCTTTTGCGTTGTTCTTTTACTTTTTCCTTCTTTGCTGCAACTCTCTTGCACCTTTGGTGCATTCGCTGAATGCTGAAGGCTCTGTGCTTTTGACACTAAAGCAGTCCCTCACTGACCCACAAGGGTCCATGAGTAACTGGAATTCCTCTGATGAAAACCCTTGTTCATGGAATGGGATCACATGCAAGGACCAAACTGTTGTGGCCATCAGCATCCCAAAGAGGAAACTCTATGGTTCTCTCCCTTCTTCTCTGGGATCTCTCTCCCAGCTCCGCCATGTCAACTTCAGGAACAACAAGCTCTTCGGAAGCTTGCCTGCACAGCTCTTTCAAGCTCAGGGACTGCAAAGCTTGGTGCTTTATGGCAATTCACTTTCTGGGTCTGTTCCTAGTGAGATTCAGAATCTCAGGTACCTTCAAACTATAGATTTATCACAAAATTTATTTAGTGGATTATTGCCTGCTGCAATTGTCAAATGCAAGAGACTCAAGGCCCTGGTTCTCAGTCAGAACAATTTTACTGGCCCCTTGCCAGATGGGCTTGGTACTGGTTTGGTTTCTCTGGAAAAACTAGACCTTTCTTCCAATCACTTCAATGGGTCGATTCCCAGTGACTTGGGAAATCTGTCAAGCCTGCAAGGAACTGTTAATTTTTCTCATAATCATTTTAGTGGTTCAATTCCAGCTAACCTTGGTAATCTTCCTGAGAAGGTTTACATTGATCTTACTTTCAACAATTTAAATGGTCCAATACCTCAAAATGGTGCTTTGATGAATAGAGGACCAACTGCCTTTATTGGCAATCCTGGTCTATGTGGTCCTCCTTTGAAGAATTCATGTGGTTCCGATACTCCATCTGTTAGCTCACCTTCCTCGTTTCCATTTATTCCAAATGGCTACCCAACTCAGGGTGCTGGTAACGGTTCCAGCGGAAGTGAGAAAAACAAAGGGCTGAGTAAGGAAGCTGTGGTTAGCATTATTGTGGGTGATATAATTGGAATTTGCCTCTTAGGTTTGCTGTTCTCTTTTTGCTACTCAAGGGTTTGTGGCTTTAACCAGGATCTGGATGAAGATGGAGTTAACAAAGCAAGGAAAGGGAGGAAAGAGTGCCTCTGCTTCAGAAAGGATGAATCTGAGGCCCTGTCTGATAATAATGTTGAGCAATATGATCTTGTCCCATTAGATTCCCATGTGACTTTTGATTTGGATGAGCTTCTCAAGGCTTCGGCTTTTGTTCTGGGTAAGAGTGGAATAGGTATTATGTACAAAGTGGTGCTTGAAGATGGGGTTGCTTTGGCCGTGAGGAGATTAGGGGAGGGAGGTTCTCAAAGGTTTAAAGAGTTCCAAACAGAGGTAGAAGCAATAGGGAAGTTAAGACATCCAAATATTGCAACTCTGAGAGCTTATTACTGGTCTGTTGATGAGAAGCTTCTCATTTATGATTATATATCCAATGGAAGCCTTGATACAGCAATTCATGGGAAGCCTGGACTTGTAACATTTACACCACTTTCGTGGTCCTATCGATTAAAGATCATGAAAGGAACCGCAAAAGGATTGGTCTATCTTCATGAGTTTAGCCCCAAAAAATATGTTCATGGAGACCTCAAGCCAAGTAACATACTTCTTGGACACAACATGGAACCCCACATTTCTGACTTTGGAGTTGGACGCCTTGCAAACATTGCTGGAGGGTCGCCAACCTTGCAATCCAGCCGAGTGGCTGCAGAGAAGCAACATGGAAGACAAAAAAGCATCTCCACTGAAGTCACTACCAATGTGTTGGGAAACGGTTACATGGCTCCAGAAGCACTGAAAGTGGTGAAGCCATCACAGAAGTGGGATGTTTACTCATATGGTGTGATATTGTTGGAAATGATCACAGGAAAATCATCCATCGTCCAAGTGGGGAACTCAGAAATGGACCTTGTTCAATGGATTCAGTTCTGCATCGAGGAAAAGAAGCCACTCTTGGAGGTGTTAGACCCTTACTTGGCTGAAGATGCGGATAAGGAGGAGGAGATTATTGGAGTTTTGAAGATTGCAATGGCTTGTGTCCAAAGCAGCCCTGAAAAGAGACCCACAATGAGGCACGTGCTTGATGCTTTGGATAGATTGACTATTTCCTCAGATTGA 2142 0.4365 MFPFALFFYFFLLCCNSLAPLVHSLNAEGSVLLTLKQSLTDPQGSMSNWNSSDENPCSWNGITCKDQTVVAISIPKRKLYGSLPSSLGSLSQLRHVNFRNNKLFGSLPAQLFQAQGLQSLVLYGNSLSGSVPSEIQNLRYLQTIDLSQNLFSGLLPAAIVKCKRLKALVLSQNNFTGPLPDGLGTGLVSLEKLDLSSNHFNGSIPSDLGNLSSLQGTVNFSHNHFSGSIPANLGNLPEKVYIDLTFNNLNGPIPQNGALMNRGPTAFIGNPGLCGPPLKNSCGSDTPSVSSPSSFPFIPNGYPTQGAGNGSSGSEKNKGLSKEAVVSIIVGDIIGICLLGLLFSFCYSRVCGFNQDLDEDGVNKARKGRKECLCFRKDESEALSDNNVEQYDLVPLDSHVTFDLDELLKASAFVLGKSGIGIMYKVVLEDGVALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIATLRAYYWSVDEKLLIYDYISNGSLDTAIHGKPGLVTFTPLSWSYRLKIMKGTAKGLVYLHEFSPKKYVHGDLKPSNILLGHNMEPHISDFGVGRLANIAGGSPTLQSSRVAAEKQHGRQKSISTEVTTNVLGNGYMAPEALKVVKPSQKWDVYSYGVILLEMITGKSSIVQVGNSEMDLVQWIQFCIEEKKPLLEVLDPYLAEDADKEEEIIGVLKIAMACVQSSPEKRPTMRHVLDALDRLTISSD 713
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01398 713 FunFam Leucine-rich repeat receptor-like protein kinase 392 484 - -
Spst10g01398 713 Pfam Protein kinase domain 415 703 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01398 713 Pfam Leucine rich repeat 140 200 IPR001611 GO:0005515
Spst10g01398 713 SUPERFAMILY Protein kinase-like (PK-like) 414 705 IPR011009 -
Spst10g01398 713 CDD STKc_IRAK 415 708 - -
Spst10g01398 713 Pfam Leucine rich repeat N-terminal domain 26 64 IPR013210 -
Spst10g01398 713 Gene3D Transferase(Phosphotransferase) domain 1 485 712 - -
Spst10g01398 713 Gene3D Phosphorylase Kinase; domain 1 377 484 - -
Spst10g01398 713 SUPERFAMILY L domain-like 27 278 - -
Spst10g01398 713 Gene3D Ribonuclease Inhibitor 77 289 IPR032675 -
Spst10g01398 713 SMART serkin_6 414 709 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01398 713 FunFam Leucine-rich repeat receptor-like protein kinase 189 284 - -
Spst10g01398 713 FunFam Leucine-rich repeat protein kinase family protein 485 711 - -
Spst10g01398 713 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 162 708 IPR046959 -
Spst10g01398 713 ProSitePatterns Serine/Threonine protein kinases active-site signature. 533 545 IPR008271 GO:0004672|GO:0006468
Spst10g01398 713 ProSiteProfiles Protein kinase domain profile. 409 708 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01398 713 Gene3D Ribonuclease Inhibitor 19 76 IPR032675 -
Spst10g01398 713 SMART LRR_typ_2 187 211 IPR003591 -
Spst10g01398 713 SMART LRR_typ_2 90 114 IPR003591 -
Spst10g01398 713 SMART LRR_typ_2 138 161 IPR003591 -
Spst10g01398 713 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 25 184 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01398 Spst-Chr10 14470442 14472712 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01398 4 713 Receptor kinase-like Gene Family AT2G01210 66.436 0.0 967
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst10g01398 Pkinase 9.7e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01398 - - gmx:100807517 1212.21