LGRPv2

Gene search

Sequence information

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Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Spst10g01394	ATGGAGGCGCAACCGCCAACCCCCTCTACTGCGCCGCCACCTCCGCCGCCGCACCTCAACTACCCCGACTCAGTTGAATCCTCGCCGCGCTCCCGAAATACTGACTCCTGGGACGAGCCCTTTGCGCCAGCGTCATCGAAACTCCGTCTGATGTGCAGCTACGGCGGACACATCGTCCCACGTCCTCACGACAAGTCCCTCTGCTACGTCGGCGGCGACACTCGCATAATCGTGGCGGAACGCGCCACCTCACTCACGGACCTCTCCACGCGCCTCTCCAAGACGTTTCTGAACGGACGCCCCTTCACGCTCAAGTACCAGCTCCCAAACGAGGACCTCGATTCCCTCATATCTGTCACCACCGATGAAGACCTCGAGAACATGATCGATGAGTATGACCGCACAGCAGCAGCCACCTCCGCTGTCAAACCCTCCCGCATCCGCCTCTTTCTCTTTCCCACCAAACCCGATTCTACTCACTCCATTCCCCCTCAAATCCTTGACACCTCAGCCAAATCAGACGATTGGTTCTTGAATGCCCTAAACGGCGCAGGGTTGCTTAACCGAGGGTTTTCCGAGTCTGCTTCTGTAAATTGCCTTCTCGGACTCGACGACGAAGTTGCTGGGAACAACCTCGAACCAGGTTCCAAGGACGTTGGGGAAGGTGGTGCTGGTGCTGGGGTTGGAGGTGGCGCTTCGCAGGGTGGATCTTTCGGCAACGGGAAAAATTTGAAGCAGGATGTTCACTCCGTTCCCGATTCGCCCATGCTCGAAACGACATCGTCGTTCGGGTCCACTTCGTCGTCACCGTCTCTCGCCAATTTGCCTCCGATTAGGGTTCATGTCGTGGAGGATCAGAAGGCGATGGGGATTGAAGAGCAGTTCGCGCAGATGGGGGTTGGTGTGGGGCAGAAGCAGCAGGATGAGGGTTTTGTTTTGCTGTCTTCGCCTCCGCCTCCGCCAGTCCCGGCTACCCTCGCCGCGGCAGGTGTGCCGATTGGGCCACCGACAATTGTCGCTGGGGATTATCACAACCGGGTTGTCTCCGATGATGAAAGATCCGATCATGGGGTTCCTGTTGGGTACAGAAAACCACCCACTCCTCAGCCACAGGTACAGTCACAGACACAAACACTTACTCCTCAATTTCAACAGAAGTCAACTGGTGGTAGTGGCGGCGTTGTTGATTTGCCTTCTCCCGATTCAGTTTCAAGTGATAGTAGTCTTGCGAATGCAATTTCTCGTCAGAAACCTGTTGTTTATCAGGAACAAGCTCAGGTTCAATCTGGAGCTACAAGGGTTCCGAGTAACCCTGTGGATCCGAAGCTCAATGTTTCTGATCCGCACGGTCGGATCCAGATGCAACAACATGTACAGGACCCTGGATTTTTGTTACAACAGCAATTTGAACAGCACCAGCAGTCGCAGCAGCTGCCACAACAGCAATTCGACCAGCACCAGCAGGGGCTGCCGCAACAGCAGCAACAGTTTATACATGGCACACATTTCATCCACCATAACCCTGCAATTTCTGCGTATTATCCTGTATATCCTTCCCAGCAACACCCTCAGCATCCACAACATCCACAGCTTTACTATGTGCATACGAGGCAGGCGCAGGCTTACAACCTGCCTGTACAGCAGTCTAATATGGGTGAGTCTGCGGGAAACCTTGCTTCTAGCCGACCACAAACTCCACCAAATCCTGCTACATTGGTTCCACAATCTGCTGCATACAATCCCATGAGAAATGCTCCCATGCCTAAAACTGAAATGAATGCTTACAGAGCTGCAACTGCCGGCACCCCTCAACTAGTTCAAGTTCCTACAAGCCAACATCAGCAACAGTATGTCACTTACTCACAGATTCACCATCCATCCCAGTCCATGGCTCCCAATTCTGCTCCACAGGCAAATTATGCTTTTGATTATCCGGACCCTGCACATGCCCAAATTTACTACTCTCAACCTTTGGCACCCACAATGTCTTCCCAGTACCAGACTATGACTGCTGCTGCTGTGATGATGCAGGAAGGTTCTGCTCAGCATCCCTCAGACAGTGTGAAGCAGCAGATAAGAACCTCACAGCCATTATAA	2097	0.5331	MEAQPPTPSTAPPPPPPHLNYPDSVESSPRSRNTDSWDEPFAPASSKLRLMCSYGGHIVPRPHDKSLCYVGGDTRIIVAERATSLTDLSTRLSKTFLNGRPFTLKYQLPNEDLDSLISVTTDEDLENMIDEYDRTAAATSAVKPSRIRLFLFPTKPDSTHSIPPQILDTSAKSDDWFLNALNGAGLLNRGFSESASVNCLLGLDDEVAGNNLEPGSKDVGEGGAGAGVGGGASQGGSFGNGKNLKQDVHSVPDSPMLETTSSFGSTSSSPSLANLPPIRVHVVEDQKAMGIEEQFAQMGVGVGQKQQDEGFVLLSSPPPPPVPATLAAAGVPIGPPTIVAGDYHNRVVSDDERSDHGVPVGYRKPPTPQPQVQSQTQTLTPQFQQKSTGGSGGVVDLPSPDSVSSDSSLANAISRQKPVVYQEQAQVQSGATRVPSNPVDPKLNVSDPHGRIQMQQHVQDPGFLLQQQFEQHQQSQQLPQQQFDQHQQGLPQQQQQFIHGTHFIHHNPAISAYYPVYPSQQHPQHPQHPQLYYVHTRQAQAYNLPVQQSNMGESAGNLASSRPQTPPNPATLVPQSAAYNPMRNAPMPKTEMNAYRAATAGTPQLVQVPTSQHQQQYVTYSQIHHPSQSMAPNSAPQANYAFDYPDPAHAQIYYSQPLAPTMSSQYQTMTAAAVMMQEGSAQHPSDSVKQQIRTSQPL	698

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Annotation information

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Seq ID	Length	Analysis	Description	Start	End	IPR	GO
Spst10g01394	698	MobiDBLite	consensus disorder prediction	367	435	-	-
Spst10g01394	698	MobiDBLite	consensus disorder prediction	550	575	-	-
Spst10g01394	698	Gene3D	-	67	152	-	-
Spst10g01394	698	MobiDBLite	consensus disorder prediction	1	22	-	-
Spst10g01394	698	MobiDBLite	consensus disorder prediction	212	274	-	-
Spst10g01394	698	MobiDBLite	consensus disorder prediction	253	274	-	-
Spst10g01394	698	MobiDBLite	consensus disorder prediction	469	493	-	-
Spst10g01394	698	ProSiteProfiles	PB1 domain profile.	47	154	IPR000270	GO:0005515
Spst10g01394	698	SMART	PB1_new	62	152	IPR000270	GO:0005515
Spst10g01394	698	Pfam	PB1 domain	63	153	IPR000270	GO:0005515

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Duplication type information

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Select	Gene	Chromosome	Start	End	Duplicated_type
	Spst10g01394	Spst-Chr10	14434131	14436441	Dispersed/Wgd

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Functional genes information

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Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Spst10g01394	44	263	MAP Kinase Kinase Kinase	AT1G79570	34.071	1.12e-24	108

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Pathway information

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Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Spst10g01394	-		-	gmx:100775954	1051.2

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Event-related genes

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Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Spst10g01394	10	14434131	14436441	Spst10g01394	10	14434131	14436441	ECH
	Spst10g01394	10	14434131	14436441	Spst4g02795	4	67656562	67658752	ECH

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