Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01328 ATGGATTCAGTGCCTGCTGATGTGTCTAACTCACATCCTGTCAAAGATCCACCCACTTCTTCTCCTGCTAAAGCGAGTGATGGGAAAGCTTCTGCTGCTTTAGTTTCTGAGCAAGATAATTCTGCACGCGAGGCACCATCTGTGATATCTCCAACTGGCATATCGTCTTGGGCCAAAAATTTGAAACTTTCTCAGTCATTTTCTGGCTTACAAGATGACTCATCAAGTGGAAATGTTGGCAAATCAACTTTTGCACGTCTCACTAGTAATTTGGGATTGAGGATGTCTCCAAAGTCTCCTGTAGCAGATGACAGTTCGAATGAAACGGCTGTACAATCTAATTTGTTTGGAACCATTACGAAAGGCCTGGTTGACACTTCTAAGAATGCTGTGAAAGCGGTGCAGGTTAAGGCACGCCATGTTGTTTCTCAGAATAAACGCCGATACCAGAAGCAAAAATGGTTGATGCATGACATGTCCAATTTTATACTCTTTACCTTACATTTTCAGGAAGGCGGTTTTGATTTAGATATGACATATATCACTGAAAACATCATTGCGATGGGATTCCCTGCTGGTGACATGAGCTCTGGATTTTTCGGCTATGTTGAAGGGTTTTACAGAAATCATATGGAAGAAGTGATTAAGTTTTTTGAAACTCACCATAAGATGAATCTCGAGGAAGATGGCAGACCTGTTGTCTCATGGCCAAGGCCAAAGGACAAAATACCCCAAATTAAAAGACTACATGATCAGATAAAAGAAGTTGAGGGATTGGATTGGAACTCTACTAAGCTTACTTTGATTTCTATCTTGTCTTTTCATACTGGAGAGAAAATTTTGAAGGTGGGTCCAACACCTTTCTCCCCTGTTCTTTTGCTGCCAAACATTCCTTTTATTTCTCCCGTACTTAAGCTATTCCAGAGGAAGGCTGGTAAATACAAAGTTTATAATCTTTGTTCTGAGCGATTGTATGATGCATCACTGTTTGAGGGGAAGGTGGCTAGCTTCCCTTTTGATGACCACAATTGCCCACCAATTCAACTGATTATATCATTCTGTCAAAGTGCTTACTCATGGTTGAAACAAGACATTGAGAATGTCGTGGTTGTCCACTGTAAGGCTGGAATGGCAAGGACAGGGTTGATGATTTCTAGTCTTCTATTATTCTTAAAGTTCTTCCCAACCGCTGAGGAATCAATGGATTACTATAATCAGAAAAGATGTATTGATGGAAAGGGACTTGTTCTGCCTAGTCAGATTAGGTATGTCAAATATTTTGAACGAGTCTTAACTTACTTCAATGGCGAAAACCCTCCTGCCCGCAGGTATTTTACTGGGCAAGATGTGGCTGTAGTATTTACTTGTCTTAATATGCATACTCACATCATGTTCTGTACAGGTGCATGCTTAGGGGATTCCGGCTTCACAGATGCCCTTACTGGATTAGGCCCTCTTTGGTTGAACACAACTATGACAGAAAATAGAAAAGTATTGAACACCGGCGATCTTGATGGCTTTGATAAGAGAAAATTGCCTTCTCCGGGATTTATGGTTGAGGTTGTGCTCGTGGATTATAATGGCGATGTTGAAACTTCGCAATCTGAAACTACTGCAACGAAATCAGATGAGAGTTCAAGTAACAGTCCTGCTCGTCCTGTCCCCGTGGAAAGGAGCACCCCTGCGCAGATTGCAGACAAAGAACCAGAGAGTCATAATAATGATAAAGATGATGTGTTTTCAGATGGGGAGGGAGAGCAATCTGCATCTTCAAGAACCAAGCAAACAAAAGCACCTTCTGAAGCAGTTGGAAAAGTTAAAAATGACACCAGAGGCTCCGATTCCAATAGAATTTCAAATCAAATTGCAAATTTAACACATGCAACAGAACAAGTTTCCTTGGGAAACAAGAGCTCCACGTCAATTCATCACGCCAGTGAGCCAAGAAGTAATGTTGATGGAAAGACAGTGTCCAGTATCGAGGTGCCCAGCGCAGAAAGTGAGTTTAAGGCCATGGCTGCAGATGCGTCTGTTTTTACCTTTGGAGATGATGATGACTACGAAAGTGATTGA 2073 0.4163 MDSVPADVSNSHPVKDPPTSSPAKASDGKASAALVSEQDNSAREAPSVISPTGISSWAKNLKLSQSFSGLQDDSSSGNVGKSTFARLTSNLGLRMSPKSPVADDSSNETAVQSNLFGTITKGLVDTSKNAVKAVQVKARHVVSQNKRRYQKQKWLMHDMSNFILFTLHFQEGGFDLDMTYITENIIAMGFPAGDMSSGFFGYVEGFYRNHMEEVIKFFETHHKMNLEEDGRPVVSWPRPKDKIPQIKRLHDQIKEVEGLDWNSTKLTLISILSFHTGEKILKVGPTPFSPVLLLPNIPFISPVLKLFQRKAGKYKVYNLCSERLYDASLFEGKVASFPFDDHNCPPIQLIISFCQSAYSWLKQDIENVVVVHCKAGMARTGLMISSLLLFLKFFPTAEESMDYYNQKRCIDGKGLVLPSQIRYVKYFERVLTYFNGENPPARRYFTGQDVAVVFTCLNMHTHIMFCTGACLGDSGFTDALTGLGPLWLNTTMTENRKVLNTGDLDGFDKRKLPSPGFMVEVVLVDYNGDVETSQSETTATKSDESSSNSPARPVPVERSTPAQIADKEPESHNNDKDDVFSDGEGEQSASSRTKQTKAPSEAVGKVKNDTRGSDSNRISNQIANLTHATEQVSLGNKSSTSIHHASEPRSNVDGKTVSSIEVPSAESEFKAMAADASVFTFGDDDDYESD 690
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01328 690 ProSitePatterns Tyrosine specific protein phosphatases active site. 371 381 IPR016130 GO:0016311|GO:0016791
Spst10g01328 690 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 348 408 IPR000387 GO:0016311|GO:0016791
Spst10g01328 690 CDD PTP_PTEN 177 429 IPR045101 GO:0016791
Spst10g01328 690 MobiDBLite consensus disorder prediction 584 598 - -
Spst10g01328 690 MobiDBLite consensus disorder prediction 33 51 - -
Spst10g01328 690 MobiDBLite consensus disorder prediction 613 660 - -
Spst10g01328 690 ProSiteProfiles Phosphatase tensin-type domain profile. 167 434 IPR029023 -
Spst10g01328 690 MobiDBLite consensus disorder prediction 532 554 - -
Spst10g01328 690 MobiDBLite consensus disorder prediction 1 51 - -
Spst10g01328 690 Gene3D Protein tyrosine phosphatase superfamily 132 265 IPR029021 -
Spst10g01328 690 PANTHER PHOSPHATASE WITH HOMOLOGY TO TENSIN 484 650 - -
Spst10g01328 690 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 308 436 IPR029021 -
Spst10g01328 690 MobiDBLite consensus disorder prediction 532 660 - -
Spst10g01328 690 Gene3D Protein tyrosine phosphatase superfamily 300 441 IPR029021 -
Spst10g01328 690 MobiDBLite consensus disorder prediction 563 583 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01328 Spst-Chr10 13803239 13808971 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01328 312 690 Protein tyrosine phosphatase (PTP) family AT3G19420 52.392 3.84e-133 404
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01328 K01110 - gmx:100784003 588.571
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01328 10 13803239 13808971 Spst10g01328 10 13803239 13808971 ECH
Spst2g00645 2 5306408 5313148 Spst10g01328 10 13803239 13808971 PCT