Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01310 ATGGCACTACTTTTACACACATGGATGAATCCAAGGCATGATGGTGCAGAAGAAGAGGGAGTAACGTACCCTACGAAACAACTGCTCCACTCTCTTACCTACCGCAGAAAGGTCCCACGACCTATTGTTAACCTTTTGAAGGAGAAAAAAGAAAACAAAATAATGGGTAGCCTTGAAGAGGAAAGAACGACAGTGGGATGGGCAGCAAGAGACCCTTCTGGGATTCTCTCTCCGTACACTTACAATCTAAGAAACACTGGCCCTGATGATGTTTACATCAAAGTTTACTACTGTGGAATTTGCCATTCTGATCTCCACCAGATTAAAAACGATCTTGGCATGTCCAATTATCCCATGGTCCCCGGACACGAAGTGGTTGGTGAGGTACTGGAGGTGGGGTCTAATGTTAGCAGGTTCAAAGTTGGTGAGGTGGTTGGAGTGGGACTCCTCGTAGGTTGCTGTAAAAACTGCAGGCCATGCCAATCAGACATTGAGCAATATTGCAGCAAGAAAATTTGGTCTTACAATGATGTTTACATCGATGGAAAGCCCACTCAGGGTGGCTTTGCTGAAACCATGATCGTTGAGCAAAAGTTTGTGGTGAAAATTCCCGAGGGTTTGACGCCAGAGCAGGTTGCACCTTTGTTGTGTGCGGGTGTGACTGTGTACAGTCCACTGTCACATTTTGGGCTGAAAGAAAGAGGGCTGAGGGGTGGAATATTGGGGCTAGGAGGAGTGGGACACATGGGGGTGAAGATAGCAAAGGCACTGGGACACCATGTGACTGTGATAAGTTCTTCTGAGAAGAAGAAAGAGGAGGCACTTGAACACCTTGGAGCTGACCAATATCTTGTTAGCTCTGATACCACTGCTATGCAAGAAGCTGCTGATTCACTTGACTACATCATTGACACAGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTCTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGAGTCATCAACACCCCTCTGCAATTTGTTTCCCCCATGGTCATGCTAGGGAGGAAATCAATAACTGGAAGTTTCATTGGGAGCATTAAGGAGACAGAGGAGATGTTGGAGTTCTGGAAAGAGAAGGGACTGAGTTCTATGATTGAAGTGGTAAACATAGATTACATTAACAAGGCCTTTGAAAGGTTGGAGAAGAACGATGTGAGATACAGGTTTGTTGTGGATGTTAAAGGGAGCAAACTTGATCAGTAA 1236 0.4563 MALLLHTWMNPRHDGAEEEGVTYPTKQLLHSLTYRRKVPRPIVNLLKEKKENKIMGSLEEERTTVGWAARDPSGILSPYTYNLRNTGPDDVYIKVYYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVSRFKVGEVVGVGLLVGCCKNCRPCQSDIEQYCSKKIWSYNDVYIDGKPTQGGFAETMIVEQKFVVKIPEGLTPEQVAPLLCAGVTVYSPLSHFGLKERGLRGGILGLGGVGHMGVKIAKALGHHVTVISSSEKKKEEALEHLGADQYLVSSDTTAMQEAADSLDYIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSIKETEEMLEFWKEKGLSSMIEVVNIDYINKAFERLEKNDVRYRFVVDVKGSKLDQ 411
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01310 411 PANTHER ALDEHYDE REDUCTASE 59 406 IPR047109 GO:0016616
Spst10g01310 411 Pfam Alcohol dehydrogenase GroES-like domain 88 203 IPR013154 -
Spst10g01310 411 SUPERFAMILY GroES-like 70 235 IPR011032 -
Spst10g01310 411 FunFam probable cinnamyl alcohol dehydrogenase 67 224 - -
Spst10g01310 411 FunFam Cinnamyl alcohol dehydrogenase 218 374 - -
Spst10g01310 411 SMART PKS_ER_names_mod 74 402 IPR020843 GO:0016491
Spst10g01310 411 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 207 372 IPR036291 -
Spst10g01310 411 Gene3D - 67 404 - -
Spst10g01310 411 FunFam Putative cinnamyl alcohol dehydrogenase 6 375 404 - -
Spst10g01310 411 CDD CAD1 65 403 IPR047109 GO:0016616
Spst10g01310 411 Gene3D - 218 374 - -
Spst10g01310 411 Pfam Zinc-binding dehydrogenase 245 366 IPR013149 -
Spst10g01310 411 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 122 136 IPR002328 GO:0008270|GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01310 Spst-Chr10 13666826 13668705 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01310 55 409 Monolignol Biosynthesis Gene Families AT3G19450 79.494 0.0 535
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01310 K00083 - gmx:100777558 634.409