Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01303 ATGAGCCTTAACTCTCAGAATCTCCAGTTGTGGTGGAGACTCTCGTCCTTCCTTCTTCTGCTTCTTCAATCTGTTACAGCTCAGTCAGTTACATCTCTTAACTCTGATGGGATTTTCTTGCTAAAATTCAAATACTCCATCCTCAGCGACCCTTTATCAGTCTTAGAGAACTGGAACTACAATGATGCAACGCCTTGTTCATGGCATGGCGTTACATGCAATGAAATAGGAGCCCCTGGTACCCCTGATTTGTTCAGAGTAACTAGTTTGACACTTCCCAATAGCCAACTTTTGGGTTCCATTTCTGAAGACTTAGGCTTGATCCAATACCTTCGTCACATCGATCTCTCCAACAATTTCCTTAATGGATCTCTACCCAGCACTATCTTTAACTCTTCCCAGCTTCAAGTACTTTCCCTCTCAAACAATGTTATCTCGGGTGAACTACCTGACCTGGTTGGTAAACTAACAAACCTTAAACTTCTTAATCTCTCAGACAATGCTTTTGCCGGGTTGATCCCAGAAAACCTCACCTCTCTACCAAACTTAACCGTTGTTTCTCTGAAGAGTAACTACTTTTCTGGTAGTGTCCCAACCGGGTTCAACTACGTGGAGATTCTGGATCTGTCGTCCAATTTATTCAACGGCTCTTTGCCCGAAGACTTTGGCGGCGAAAGCTTGCGCTACTTGAATCTCTCTTACAACAAGATTTCGGGAACAATTCCTCCAGCATTCGCGAAACAGATTCCAGGAAACACAACAGTGGACCTCTCATTCAACAATCTGACAGGACCAATACCAGAGTCTTTGGCTTTGCTCAACCAGAAGACAGAGTTTCTATCAGGAAATTCTGATCTTTGTGGTAAGCCTCTGAAGATTCTGTGCACCGTTCCCTCTACTGAGTCCAGCGCTCCACCCAATGTCACCACATCTTCACCAGCCATTGCTGCCATACCAAAAATTGACTCAAACCCTTCAGCAAACTCAACAGGAACCACCACCAGTTCTCAGAATGTATCACCAAGTGGCCTAAAACCTGCCACCATAGCAGCAATTGTGGTAGGAGACTTAGCCGGCATGGCCCTTTTGGCCCTCATCATTCTCTTCATCTACCAACAGAGAAAGAAAAGACATCCAGATCCAAATTCAAAACCCAACACTAATGCTGCTTCTGCCAACAACTCAGAAAAGAAAGACGAAACTGCTTCGAGACAAGATGCAGATACAAGAACAGTAACTCCTTCACTTCCTTGTTCCTGCTTAACAATCAAAGAAGAAGAAACTTCGGAAGCAACTAGCTCCGACAGTGACCACGAGAGTAACACGGCAGTGGACATCATGGCAGCGCAAAACGGGAACCTTCCGAAACAAGGCACTCTTGTAACCGTTGATGCGGAAACAAATTTGGAGCTTGAGACTCTGCTTAAGGCTTCAGCGTATATTTTGGGAAACAGCCACGTCAGCATTGTTTACAAGGCAGTGCTAGAGGATGGGAGAGCCTTTGCTGTTAGAAGGATCGGTGAGCGTGGGATTGAGAAAAGGAAGGACTTTGAGAACCAAGTGCGTGCCATTGCAAAGCTTCGTCATCCCAATTTGGTTAAGGTTCGTGGCTTCTGCTGGGGTCGAGATGATAAACTCCTAATATGTGACTATGTCCCCAATGGCAGCCTCGCCACCATAGATCACAGAAAAGCAAGTTCGTCCCCTTTGAACTTGTCCTTGGAGGTACGGTTGAAGATAGCAAAAGGGATGGCACGAGGGTTGGCCTTCATTCACGAGAAGAAACACGTGCATGGCAATGTTAAACCCAGCAACATCCTGCTAAACTCTGAAATGGAAGCCATCATAAGCGATTTTGGGCTAGACCGGCTCCTCTTGAACGATGTGACCCACAGAGGAAACAGTTCTGGTAGACAATTAATGGCGAGCCAGAGAAGCCAGCAAGAGCTGGCATTTGGGTCAAGTCCCTTCGCAGCAATGGGATCATCATCTAGTGGTGCGGGCCACATAATGCCCTATCGAGCCCCAGAGTCACTTGAGAACATGAAACCAAGTCACAAATGGGACGTGTACTCTTTTGGGATGGTGTTGCTGGAACTTCTAACTGGAAAGGTTTTCCTGGAGCGAGAGCTGGAACAGTGGAATGAACCGAGTTTAATGGAGGAGGAAAAGAGCCGGGTGTTGAGAATGGCTGACGTTGCAATAAAATCTGAAATAGAAGGGAGAGAGGATGTGGTATTGGCATGGTTCAAGTTGGGTCTTAGCTGTGTTTCTCATGTCCCACAAAAGAGACCTTCTATCAAAGAGGCTCTACAAATCTTAGACAAGATCCCTTGTGCTGCTCTCAATTAA 2352 0.4596 MSLNSQNLQLWWRLSSFLLLLLQSVTAQSVTSLNSDGIFLLKFKYSILSDPLSVLENWNYNDATPCSWHGVTCNEIGAPGTPDLFRVTSLTLPNSQLLGSISEDLGLIQYLRHIDLSNNFLNGSLPSTIFNSSQLQVLSLSNNVISGELPDLVGKLTNLKLLNLSDNAFAGLIPENLTSLPNLTVVSLKSNYFSGSVPTGFNYVEILDLSSNLFNGSLPEDFGGESLRYLNLSYNKISGTIPPAFAKQIPGNTTVDLSFNNLTGPIPESLALLNQKTEFLSGNSDLCGKPLKILCTVPSTESSAPPNVTTSSPAIAAIPKIDSNPSANSTGTTTSSQNVSPSGLKPATIAAIVVGDLAGMALLALIILFIYQQRKKRHPDPNSKPNTNAASANNSEKKDETASRQDADTRTVTPSLPCSCLTIKEEETSEATSSDSDHESNTAVDIMAAQNGNLPKQGTLVTVDAETNLELETLLKASAYILGNSHVSIVYKAVLEDGRAFAVRRIGERGIEKRKDFENQVRAIAKLRHPNLVKVRGFCWGRDDKLLICDYVPNGSLATIDHRKASSSPLNLSLEVRLKIAKGMARGLAFIHEKKHVHGNVKPSNILLNSEMEAIISDFGLDRLLLNDVTHRGNSSGRQLMASQRSQQELAFGSSPFAAMGSSSSGAGHIMPYRAPESLENMKPSHKWDVYSFGMVLLELLTGKVFLERELEQWNEPSLMEEEKSRVLRMADVAIKSEIEGREDVVLAWFKLGLSCVSHVPQKRPSIKEALQILDKIPCAALN 783
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01303 783 Pfam Protein kinase domain 481 772 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01303 783 CDD STKc_IRAK 482 777 - -
Spst10g01303 783 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 204 778 IPR046959 -
Spst10g01303 783 SUPERFAMILY Protein kinase-like (PK-like) 481 774 IPR011009 -
Spst10g01303 783 SUPERFAMILY L domain-like 38 293 - -
Spst10g01303 783 CDD TM_EGFR-like 348 378 - -
Spst10g01303 783 MobiDBLite consensus disorder prediction 319 342 - -
Spst10g01303 783 ProSiteProfiles Protein kinase domain profile. 476 777 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01303 783 FunFam Leucine-rich repeat receptor-like protein kinase 33 199 - -
Spst10g01303 783 Pfam Leucine rich repeat N-terminal domain 34 74 IPR013210 -
Spst10g01303 783 Gene3D Transferase(Phosphotransferase) domain 1 552 781 - -
Spst10g01303 783 Pfam Leucine Rich Repeat 226 246 IPR001611 GO:0005515
Spst10g01303 783 Pfam Leucine Rich Repeat 111 128 IPR001611 GO:0005515
Spst10g01303 783 FunFam Leucine-rich repeat receptor-like protein kinase 203 297 - -
Spst10g01303 783 MobiDBLite consensus disorder prediction 376 440 - -
Spst10g01303 783 Gene3D Ribonuclease Inhibitor 33 202 IPR032675 -
Spst10g01303 783 Gene3D Ribonuclease Inhibitor 203 297 IPR032675 -
Spst10g01303 783 Gene3D Phosphorylase Kinase; domain 1 445 551 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01303 Spst-Chr10 13632876 13635510 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01303 14 777 Receptor kinase-like Gene Family AT4G37250 49.873 0.0 691
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Spst10g01303 Pkinase 1.7e-32 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01303 - - gmx:100820334 1263.06