Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01276 ATGCTGCGTCTGTGCTACGGTCCTCTCGATTGCTGCTTCCGACGCCGTGGTGCCGCAGACGGACTTCTCTGGCACACCGACTTGAAACCCCACGCCTCCGGTGACTTTTCCATCGCCGTCGTTCAGGCCAATTACAGTCTCGAGGATCAGAGCCAAGTCTTCACCTCCCCCTCGGCCACCTACGTTGGCGTCTACGACGGCCACGGCGGCACCGAGGCTTCTAGATTCGTCAACAAACGACTCTTCCCTTATTTGCATAAATTTGCCACTGAGCAAGGGGGTCTGTCTGTGGATGTCATAAAAAAGGCATTTAGTGCCACAGAGGAGGAATTCCTGCATTTGGTGAAGTTATCCTTGCCTATTAGTCCCCAGATTGCTTCTGTGGGATCCTGTTGCCTTTTCGGTGCAATTTCTAATAATGTGTTGTATGTTGCCAATCTCGGAGACTCTAGGGCTGTTCTTGGCAGGAGAGACGTAGAGAGAAAGAACAGTCCAGTGGTGGCACAGCGCTTGTCAACTGATCATAATGTAGCTGATGAGGAAGTGAGAAGAGAAGTTGAAGCTCTCCATCCGGATGACTCTCACATTGTAGTTTATAGCCGAGGAGTTTGGAGGATTAAGGGCATTATTCAGGTGTCAAGGTCTATTGGTGATGCGTATTTGAAGAAACCTGATTTCTACCGAGACCCAGTTTTTCAGCAATATGGAAATCCTGTTCCTTTGAAGCGTCCTGTAATGACGGCTGAACCATCAATCATTATTAGGGAGCTTGAGTCAGAGGATTTATTCTTGATATTTGCCTCTGATGGCCTGTGGGAGCAATTAAGTGATGAAGAAGCAGTTCAGATTGTTTTCAAGTATCCAAGGGCTGTGAGTGTCCAAAAAACTGTTATTCGGGAGCTGCATATGATGCTAAACTTTTTACATATTTACAAGGATTTTGATTTGTGTTTCCGGTACTTGCAGGGAATTGCCAAGAGACTGGTGAGGGCTGCTCTTCAAGAAGCTGCAAAGAAGAGAGAGATGAGATATGATGACATAAAGAAAATTGACAAAGGAATAAGACGACACTTCCATGATGATATCACTGTGGTTGTAGTCTATCTTGATCACCATGCGGGTTCCTCTAATGGTAGATTCAAGCAAACTGCTGTTGGCTGTACAACTGCCCCTGTTGATATTTTTTCCCTAAATACGGATGTAGCAGAAGCAGAAAAGAGAATGCTTAGTGCAGTTGCCTAA 1242 0.4605 MLRLCYGPLDCCFRRRGAADGLLWHTDLKPHASGDFSIAVVQANYSLEDQSQVFTSPSATYVGVYDGHGGTEASRFVNKRLFPYLHKFATEQGGLSVDVIKKAFSATEEEFLHLVKLSLPISPQIASVGSCCLFGAISNNVLYVANLGDSRAVLGRRDVERKNSPVVAQRLSTDHNVADEEVRREVEALHPDDSHIVVYSRGVWRIKGIIQVSRSIGDAYLKKPDFYRDPVFQQYGNPVPLKRPVMTAEPSIIIRELESEDLFLIFASDGLWEQLSDEEAVQIVFKYPRAVSVQKTVIRELHMMLNFLHIYKDFDLCFRYLQGIAKRLVRAALQEAAKKREMRYDDIKKIDKGIRRHFHDDITVVVVYLDHHAGSSNGRFKQTAVGCTTAPVDIFSLNTDVAEAEKRMLSAVA 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01276 413 SMART PP2C_4 25 367 IPR001932 -
Spst10g01276 413 ProSiteProfiles PPM-type phosphatase domain profile. 35 369 IPR001932 -
Spst10g01276 413 SUPERFAMILY PP2C-like 44 371 IPR036457 -
Spst10g01276 413 Pfam Protein phosphatase 2C 56 285 IPR001932 -
Spst10g01276 413 ProSitePatterns PPM-type phosphatase domain signature. 61 69 IPR000222 GO:0043169
Spst10g01276 413 CDD PP2Cc 48 369 IPR001932 -
Spst10g01276 413 Gene3D - 26 378 IPR036457 -
Spst10g01276 413 PANTHER PROTEIN PHOSPHATASE 34 368 IPR015655 GO:0004722|GO:0006470
Spst10g01276 413 FunFam Probable protein phosphatase 2C 42 26 306 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01276 Spst-Chr10 13458196 13460685 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01276 17 376 PP2C-type Phosphatase Gene Family AT3G51370 52.989 1.15e-135 392
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01276 - K01102 gmx:100812137 682.945
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01276 10 13458196 13460685 Spst10g01276 10 13458196 13460685 ECH
Spst2g00621 2 5133253 5136722 Spst10g01276 10 13458196 13460685 PCT