Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01267 ATGATCGAAGAGGTGTGTGCTTCCGAAGCACCCCATTCCCAACCCAACCCTGAGCTCTTTGTTAAGTTTGGTTCTAGGCGCACGAAGTTTACCTATACATTCTTAAGCGACTGCGATCGGAACCTCTTCTGCGGCGCAGCAATGGGACACTCTAACGTGTGGAACTCTCACCCCAAAAATTACGGCCCTGGTTCTCGCACTTGCCGTGTGTGTGGGAACCCTCATGGATTGATCAGGAAGTACGGCCTTATGTGCTGCAGGCAGTGCTTCCGCAGCAATGCCAAGGAAATTGGCTTCATCAAGTATCGCTAA 312 0.5128 MIEEVCASEAPHSQPNPELFVKFGSRRTKFTYTFLSDCDRNLFCGAAMGHSNVWNSHPKNYGPGSRTCRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKYR 103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01267 103 Gene3D 30s Ribosomal Protein S14; Chain N 48 103 IPR043140 -
Spst10g01267 103 Pfam Ribosomal protein S14p/S29e 54 103 IPR001209 GO:0003735|GO:0005840|GO:0006412
Spst10g01267 103 PANTHER 40S RIBOSOMAL PROTEIN S29 48 103 IPR039744 GO:0003735|GO:0008270
Spst10g01267 103 FunFam 40S ribosomal protein S29 48 103 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01267 Spst-Chr10 13403647 13406172 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01267 48 103 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 92.857 1.28e-34 111
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01267 K02980 - pvy:116132547 131.339