Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01237 ATGTCTCTATCGCCGGACTCTTCCTCCGCCGCCGCTGACTTACTCTGCCGCGAACACGCCACCGAGGTCACCTCGGACCACCATCTTCCGCCCCCGGATTCCGATGAGGGCCCCATCGCTGGCCTCTTCGACGCCGAGGCCCACCACATGCCAGAGAAGGACTACCTCAGCCGCTGCCGCGACCGCTCCGTCGACGTCACCGCGCGCCTCGACGCCGTGAACTGGATCTTGAAGGTCCACGCATTCTACCAGTTTTCTCCGGTGACGGCGTTTCTCTCCGTCAACTATCTCGACCGTTTCCTCTCTCTATGTTCTCTTCCGCAATCGAGTGGGTGGCCGTTTCAGCTGCTATCAGTGGCATGTTTGTCCCTCGCTGCTAAAATGGAAGAGTCTCATGTGCCGTTCTTACTGGACCTGCAATTGTTCCAGCCCAAATTCGTGTTTGAGCCCAAAACGATTCAGAGAATGGAGCTCTGGGTCATGTCCAATCTCAAATGGAGACTTCGCTCCGTCACGCCCTTCGATTATCTTCACTATTTTATCTCTAAGCTCCCTTCTTCCTCTTCCTCCGAATCCACTAATCACTTTTTCTCCACCGCCTCCAGTCTCATTCTCAGCACCACCCGTGGTAACCTTCTTCTACTCCAAACGACTACGTCGTTTTCAGATGTGTTTATCTCACATCGTTTCGATTGTGCAGTGATCAACTTCTTGGGATTCGCGCCCTCCACCGTGTCAGCCGCCGCCGTGCTTTGCTCGGCCGGCCGTGACATTGCTTCGGCCAACGGTCAATTGCCGCTGAGTTTTCATGACAGAGTAAACAAGGAAATGGTGAGACGCTGTCACCAACTAATGGAGGAGTACGTGGTGGACACGTGTTCCGCATCTAGCTCCATCATCAAAGCGAGAGTAGCCGAGCCGCCGCCACCTTCCAGCCCCGTCGGCGTGCTCGACGCTGCCACCTGTGGCAGCTGCGACACACCATCCGAGAGAAATTTCCCCGGCGCAACTGAGGAACACCAACAAGAAGCCGAGCCGCCAAATAAACGGCCTCGATCCTCTGCTCCGGATCCGCCGCAGCGGGAGAAAGAGGTTGATTACTTTCTGGCATTGGGCTTGAAGGGACATGGTAGAAATTTGGTAAATGGAATTGGCGTGGTTGGGCCTAATGGGCCAGCGGGGCTGAGCCACGTATCCGACAAGTGGGTCCATGGTTGGATCTTGAATCTTGAGGGATATTACGGTAAATTGGTGTTGGGAAAGAAGCGTACAATGTAG 1278 0.5501 MSLSPDSSSAAADLLCREHATEVTSDHHLPPPDSDEGPIAGLFDAEAHHMPEKDYLSRCRDRSVDVTARLDAVNWILKVHAFYQFSPVTAFLSVNYLDRFLSLCSLPQSSGWPFQLLSVACLSLAAKMEESHVPFLLDLQLFQPKFVFEPKTIQRMELWVMSNLKWRLRSVTPFDYLHYFISKLPSSSSSESTNHFFSTASSLILSTTRGNLLLLQTTTSFSDVFISHRFDCAVINFLGFAPSTVSAAAVLCSAGRDIASANGQLPLSFHDRVNKEMVRRCHQLMEEYVVDTCSASSSIIKARVAEPPPPSSPVGVLDAATCGSCDTPSERNFPGATEEHQQEAEPPNKRPRSSAPDPPQREKEVDYFLALGLKGHGRNLVNGIGVVGPNGPAGLSHVSDKWVHGWILNLEGYYGKLVLGKKRTM 425
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01237 425 Gene3D - 52 169 - -
Spst10g01237 425 MobiDBLite consensus disorder prediction 328 362 - -
Spst10g01237 425 Pfam Cyclin, N-terminal domain 44 168 IPR006671 -
Spst10g01237 425 SUPERFAMILY Cyclin-like 29 168 IPR036915 -
Spst10g01237 425 Gene3D - 42 282 - -
Spst10g01237 425 SMART Cyclin_C_2 171 313 IPR004367 -
Spst10g01237 425 PANTHER CYCLINS 43 290 IPR039361 -
Spst10g01237 425 FunFam D2/4-type cyclin 52 169 - -
Spst10g01237 425 ProSitePatterns Cyclins signature. 69 100 IPR006671 -
Spst10g01237 425 CDD CYCLIN_AtCycD-like_rpt2 171 285 - -
Spst10g01237 425 CDD CYCLIN_AtCycD-like_rpt1 68 166 - -
Spst10g01237 425 SMART cyclin_7 74 162 IPR013763 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01237 Spst-Chr10 13130360 13132620 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01237 13 291 Core Cell Cycle Gene Families AT1G70210 42.708 6.18e-64 207
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01237 K18810 - gmx:100776178 489.574
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01237 10 13130360 13132620 Spst10g01237 10 13130360 13132620 ECH