Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01216 ATGGCTATGCTTAGGTTGAGGTCACTTTCCTATGTCTGTTGTCTCCTCCTGATATCAATTTTTATATCTCGAGTCAGTGCCGATAACAATACAGAAAACTTCCACTACTTCTGCAATGAAAAAAACGACAGAGGAAACTACACAGCCAACAGCACCTATAACACCAACCTCAACACCCTTTTGTCCACTCTCACTTCCGACACACAAATCAACTACGGTTTCTACAATCTTACAAACGAGGAAAACACTGACAGAGTGTACGCAATTGGGCTGTGCAGAGGAGACGTTAAGCCAGACGAATGCCGCACCTGCCTGGAACATTCGAGAGGCAATCTCAGTCAGCTTTGTCCAAACCGAAAGGAAGCAATTGGGTGGTACGAGGATGAGAACTGCATGTTGCGCTACTCAGACCGCAAAATATTTAGCCTCATGGAAACTGGACCAGCGTATTTTGCGTGGAGTTCAAAGAATGCAACGCAAGCGGAGGAGTTCAATAGAGTGGTGAAGGACTTGCTTGATGGGTTGAGAAGCAAAGCTGCATCGGGAGACATTCGTAGTAAATATGCTACAGCAAATGCAATTGGACCAGATAACAAAACCATTTACGGGCTTGTGCAGTGCACGCCTGATTTGTCTGGACCAGACTGCGATAACTGCTTGTATCAGTCCATCCTAGAAGTCCCAAAATGTTGTGCTAGTAGAATAGGTGTTATAATTGTTAGACCCAGTTGCAACCTGAGATATGAAACTTCATTTCTCTTCTATGATGCTCCAGCAGATACACCATCACCAACACCCTCACCCTCACCATTTTCGCCACCTTCTAGGGTCACTAGTAACACTTCCACAGAAGTCACACTAAAGGACCTTAAATCAAAATTCATATTTGACGCGGTTGATGATATGAAGTGTACAAAATTTTGGTTGTTAGGAATTAGAAGTTTTCGTTGCTTAAACTTCATGGAAAGTGTTGCATTTGACCAAATACAAGGCAAACTAAATTTGAAAATGCCAATGATACGTGAACAAGCTGGCAACACTACAAGTTTGATTCAGACAATCACTTGCTCGCCCAATAAAGAAGCCTTCTATCATCCATTTTTTGTTACTTCTCATTCCCACAACACAATCAACAAATCCAACATGCCTCACTTTTCCTTTCTCTGTTGTCTGCTTCTCATAACAATTTTTATATCTCAAGTTAGTGCAGCAAACAACGTCACCGCACAAGGCTTCCACTACTTCTGCGATGAAGAAAACAACAACCAGAGAGGAAACTACACAACCAATAGCGCCTATCACACCAATCTCGATACCCTTTTGTCCACTCTCATTTCCAATACAGAAATTGATTACGGTTTCTACAATTTCACAAACGGCGAAAACAATGACACAGTGTACGCCATTGGGCTGTGTAAAGGAGACGTTAAGGCACAGGAATGCCGCTCATGCCTCAACGATTCGAGGGCCAATCTCACGGAACTTTGTCCAAACAAAAAGGAAGCAATTGGGTGGTACACGGATGAGAAGTGCATGTTGCGCTACTCAGACCGCAAAATATTCGACCTCATGGAAACTGGACCGGCGTATTTTGTGTGGAATTTAACGAATGCAACGAAAGCGGATGAGTTCAACGGAGTGGTGAAGAACTTGCTTAATGGGTTGAAAAGCAAAGCTGCTGCAGGAGACTCTCGTATTAAATATGCCACAGCAAATGCAACTGGACCAGATGACAAAACCATTTATGGGCTTGCGCAGTGCACGCCTGATTTGTCTGACGTAGAGTGCGATAACTGCTTGCTTCAGTCCATCGAAGAAGTCCCAAGATGTTGTGATAACAGCGCAGGTGCTAGAATTGTTAGACCCAGTTGCTATCTGAGATATGAAACTTCATTTCTCTTCTATGGTGCTCCAGCATTTGAATCGTCGGCTCCCCCTCCACCGATCACCCCCGAAGGAAAAAGCAACACAACCACCATCATAGCAATAGCAGTATCAGCTGGTGTAGTTGCTTCTGCCATGCTGATTTTTATCTTCATGCGTTCAACAGTGAGGAAGTCATGGAAAAAGTTTGAAAGTAAGTGGAAGAACTGGTTTACCGGTACTCTTCCCAGTGGACAAGAGATTGCCGTCAAAAGGTTGTCAGCGAATTCTAGACAAGGTGATACAGAATTCAAGAATGAGGTGCTTTTAGTGGCCAAACTTCAGCACCGAAATTTAGTTAGACTACTCGGTTTCTCTATGGAAGGAAGAGAAAAGCTACTTGTCTATGAATTTGTTCCAAATAAAAGCCTTGATTACTTCATATTTGACGAAGAGATGAATCCTAAGATAGCAGATTTTGGCTTGGCAAGGTTATTTGTTGTGGACCAAACTCACGAAGATACACAGAGAGTTGTTGGTACATATGGATATATGGCACCCGAGTATGCATTGCATGGACAGTTTTCAGAGAAGTCAGATGTTTTTAGCTTTGGTGTATTGGTTCTTGAGATTGTAAGTGGCCAGAAAATCAGTAGCGTTCAACACGGTGAGAATACAGGCGATCTACGCAGTCTTGCATGGCGGAGTTGGAGGGAAGGGAGAGCTAGAGATATTGTAGATCCGACATTGAACAATGGTTCAGAAAGTGAAATAATGAGATGCATCCATATTGGATTATTATGCGTTCAAGACAATGTAGGTGCCAGACCCAGCATGGCTTCTGTTGTACTCATGCTTAGTAGCCATTCTTTCAGTCTGGCAGTACCTATGGCACCTGCATTTTATGGGGATATGTCTAGACTCTTTGCAGATATGCAGTTATGGGAGATTAGTTCAGGGACAACAAGATCGAACGAACACACCACTAGATCAGATGAAGATTCGCTAAATGAGGCTTCAATTACTGATCCATATCCTCGCTAG 2907 0.4314 MAMLRLRSLSYVCCLLLISIFISRVSADNNTENFHYFCNEKNDRGNYTANSTYNTNLNTLLSTLTSDTQINYGFYNLTNEENTDRVYAIGLCRGDVKPDECRTCLEHSRGNLSQLCPNRKEAIGWYEDENCMLRYSDRKIFSLMETGPAYFAWSSKNATQAEEFNRVVKDLLDGLRSKAASGDIRSKYATANAIGPDNKTIYGLVQCTPDLSGPDCDNCLYQSILEVPKCCASRIGVIIVRPSCNLRYETSFLFYDAPADTPSPTPSPSPFSPPSRVTSNTSTEVTLKDLKSKFIFDAVDDMKCTKFWLLGIRSFRCLNFMESVAFDQIQGKLNLKMPMIREQAGNTTSLIQTITCSPNKEAFYHPFFVTSHSHNTINKSNMPHFSFLCCLLLITIFISQVSAANNVTAQGFHYFCDEENNNQRGNYTTNSAYHTNLDTLLSTLISNTEIDYGFYNFTNGENNDTVYAIGLCKGDVKAQECRSCLNDSRANLTELCPNKKEAIGWYTDEKCMLRYSDRKIFDLMETGPAYFVWNLTNATKADEFNGVVKNLLNGLKSKAAAGDSRIKYATANATGPDDKTIYGLAQCTPDLSDVECDNCLLQSIEEVPRCCDNSAGARIVRPSCYLRYETSFLFYGAPAFESSAPPPPITPEGKSNTTTIIAIAVSAGVVASAMLIFIFMRSTVRKSWKKFESKWKNWFTGTLPSGQEIAVKRLSANSRQGDTEFKNEVLLVAKLQHRNLVRLLGFSMEGREKLLVYEFVPNKSLDYFIFDEEMNPKIADFGLARLFVVDQTHEDTQRVVGTYGYMAPEYALHGQFSEKSDVFSFGVLVLEIVSGQKISSVQHGENTGDLRSLAWRSWREGRARDIVDPTLNNGSESEIMRCIHIGLLCVQDNVGARPSMASVVLMLSSHSFSLAVPMAPAFYGDMSRLFADMQLWEISSGTTRSNEHTTRSDEDSLNEASITDPYPR 968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01216 968 MobiDBLite consensus disorder prediction 942 968 - -
Spst10g01216 968 ProSiteProfiles Gnk2-homologous domain profile. 35 140 IPR002902 -
Spst10g01216 968 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 787 912 - -
Spst10g01216 968 Pfam Protein kinase domain 769 847 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01216 968 ProSiteProfiles Protein kinase domain profile. 533 913 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01216 968 SUPERFAMILY Protein kinase-like (PK-like) 702 924 IPR011009 -
Spst10g01216 968 Gene3D - 32 139 IPR038408 -
Spst10g01216 968 Gene3D - 415 519 IPR038408 -
Spst10g01216 968 Gene3D - 528 632 IPR038408 -
Spst10g01216 968 Gene3D - 148 252 IPR038408 -
Spst10g01216 968 ProSiteProfiles Gnk2-homologous domain profile. 526 633 IPR002902 -
Spst10g01216 968 FunFam Cysteine-rich receptor-like protein kinase 10 528 632 - -
Spst10g01216 968 ProSiteProfiles Gnk2-homologous domain profile. 146 253 IPR002902 -
Spst10g01216 968 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 32 140 - -
Spst10g01216 968 ProSiteProfiles Gnk2-homologous domain profile. 415 520 IPR002902 -
Spst10g01216 968 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 391 642 - -
Spst10g01216 968 Pfam Salt stress response/antifungal 537 630 IPR002902 -
Spst10g01216 968 Pfam Salt stress response/antifungal 38 137 IPR002902 -
Spst10g01216 968 Pfam Salt stress response/antifungal 416 517 IPR002902 -
Spst10g01216 968 Pfam Salt stress response/antifungal 156 250 IPR002902 -
Spst10g01216 968 Gene3D Phosphorylase Kinase; domain 1 683 759 - -
Spst10g01216 968 FunFam Putative DUF26-domain receptor-like protein kinase family protein 681 759 - -
Spst10g01216 968 Gene3D Transferase(Phosphotransferase) domain 1 765 915 - -
Spst10g01216 968 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 413 520 - -
Spst10g01216 968 FunFam Cysteine-rich receptor-like protein kinase 10 148 252 - -
Spst10g01216 968 MobiDBLite consensus disorder prediction 259 280 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01216 Spst-Chr10 12943842 12951970 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01216 387 922 Receptor kinase-like Gene Family AT4G21410 39.939 4.70e-139 430
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01216 Pkinase 3.6e-14 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01216 - - var:108324787 1173.69