Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01215 ATGGCTGCTAATTCCTTTCTCTGTTGTCTTTGTGTCATCATAATCATATCGCAAGCCAACGCCCAGACCTGTGATAACAACAAAGGCAACTACACAGTCAACAGCACTTACTACAACAACCTCAACACCGTCTTATCCAGTTTCTCTTCCCACGCTGAAATCAAATACGGTTTCTACAATTTCTCACATGGCCAAGGCACAGACAAAGCATACGCCATGGGGGTCTGTAGAGGCGATCTCACACCGGACGAATGCCTCAAATGCCTCAACGATTCCAGAGAGGCTATCACAAAGGCCTGTCCAAACCAGAAAGAGGCAATTGCGTGGGGTGGTGAATGCATCTTGCGCTACTCTAACCGCTCCATATTTGGCCTCATGGAGAATCAACCTATGGTGCTACTAGTGTACACGCTGGATGCAAGGGGTTCGCTGGATCAATTCAATGAAGCGCTGGGTAGCTTGATGAAGAATCTAACACGCATAGCTGCATCAGGTGACTCTCGCCGTAAATATGCCACAGGCAGCACACCTGCTCCAGATTTTCAAACCATATACGGTTACACGCAGTGCATGCCTGATTTGTCATCGGAAGATTGTACCACGTGTTTGAATGATGCTATCTCAAAAATCCCAGAGTGCTGTAGTGGCAAGGCTGGAGGCAATGTTTTGAAGCCCAGTTGTAGAATTAGATTTGACCCTTATATCTTCTACAGAACTACACAGAAGTTAGACCCAGATGTTCCACCAAAAACGCCCCCCCAATCGTCACCCTTCACCAACGACACTTATGTACATTCACAAGAAAAGAGCATCACATCACGAACTATTATCGCCGTAGCAGTGCCAGTGGCTGCTGTTGTTTTAGCGCTCAGTCTTTTCTGCATATATCTGACAGGTCGGCTTTCCAATGGACAGGTAATTGCTGTCAAAAGGTTGTCAACAGATTCTGGGCAAGGAGATATGGAATTCAAGAATGAAGTGCTGTTATTGGCCAAGCTTCGACACCGAAATTTAGTTGGGCTAATTGGTTTCTGCTTGGAAGGAAGAGAAAGGCTGCTTATCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATTTTGGAATGGCAAGATTGGTTCACGTGGATCAGACTCAAGCAAATACGAATAGAATTGTCGGAACCTATGGATATATGGCACCTGAGTATGCAATATATGGTCAGTTTTCAACAAAATCAGATGTTTTTAGTTATGGTGTACTGGTTCTTGAGGTTGTCAGTGGCCGAAAAAACATTGGTGTTCGTCATGAGGAGGACATGGAGGATCTATTGAACATTACATGGCGAAACTGGAAGGATAGAACAACTACAAATATTGTTGACCCAAAATTAATCAACGGTTCGCGAAATGAAATAATGAGATGTATCCACATTGGGTTGCTATGTGTTCAAGAAAATGTGGCTGCCAGACCAACGATGGATTCTGTTGTACTCATGCTCAATAGCTATTCTATCACTCTCCCAGTACCTTCAGAACCTGCATTTGTTGCGAATTATACAAGAAGCTTTTCAAACATGTTGTCATCGGAGCATAACTCAAGGGAAACAAGATCAAGTGAATCCCCATATAAAACAGCTCAAATGTCTGTAAATGAGGCTTCAATTACTGAGCCATATCCTCGCTAG 1674 0.4337 MAANSFLCCLCVIIIISQANAQTCDNNKGNYTVNSTYYNNLNTVLSSFSSHAEIKYGFYNFSHGQGTDKAYAMGVCRGDLTPDECLKCLNDSREAITKACPNQKEAIAWGGECILRYSNRSIFGLMENQPMVLLVYTLDARGSLDQFNEALGSLMKNLTRIAASGDSRRKYATGSTPAPDFQTIYGYTQCMPDLSSEDCTTCLNDAISKIPECCSGKAGGNVLKPSCRIRFDPYIFYRTTQKLDPDVPPKTPPQSSPFTNDTYVHSQEKSITSRTIIAVAVPVAAVVLALSLFCIYLTGRLSNGQVIAVKRLSTDSGQGDMEFKNEVLLLAKLRHRNLVGLIGFCLEGRERLLIYEFVPNKSLDYFIFDFGMARLVHVDQTQANTNRIVGTYGYMAPEYAIYGQFSTKSDVFSYGVLVLEVVSGRKNIGVRHEEDMEDLLNITWRNWKDRTTTNIVDPKLINGSRNEIMRCIHIGLLCVQENVAARPTMDSVVLMLNSYSITLPVPSEPAFVANYTRSFSNMLSSEHNSRETRSSESPYKTAQMSVNEASITEPYPR 557
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01215 557 FunFam Cysteine-rich receptor-like protein kinase 10 132 236 - -
Spst10g01215 557 ProSiteProfiles Gnk2-homologous domain profile. 19 122 IPR002902 -
Spst10g01215 557 Pfam Protein tyrosine and serine/threonine kinase 367 493 IPR001245 GO:0004672|GO:0006468
Spst10g01215 557 ProSiteProfiles Protein kinase domain profile. 208 500 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01215 557 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 376 501 - -
Spst10g01215 557 MobiDBLite consensus disorder prediction 523 557 - -
Spst10g01215 557 SUPERFAMILY Protein kinase-like (PK-like) 297 536 IPR011009 -
Spst10g01215 557 Gene3D Phosphorylase Kinase; domain 1 289 353 - -
Spst10g01215 557 ProSiteProfiles Gnk2-homologous domain profile. 129 236 IPR002902 -
Spst10g01215 557 FunFam Uncharacterized protein 292 357 - -
Spst10g01215 557 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 17 122 - -
Spst10g01215 557 Gene3D - 17 121 IPR038408 -
Spst10g01215 557 Gene3D - 138 236 IPR038408 -
Spst10g01215 557 Gene3D Transferase(Phosphotransferase) domain 1 354 503 - -
Spst10g01215 557 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 369 554 - -
Spst10g01215 557 Pfam Salt stress response/antifungal 24 119 IPR002902 -
Spst10g01215 557 Pfam Salt stress response/antifungal 145 232 IPR002902 -
Spst10g01215 557 MobiDBLite consensus disorder prediction 535 550 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01215 Spst-Chr10 12919545 12922675 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01215 22 557 Receptor kinase-like Gene Family AT4G38830 36.907 4.39e-129 390
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01215 PK_Tyr_Ser-Thr 3e-12 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01215 - - gmx:113000777 729.939