Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01212 ATGGCACCGGAGTATATAATGCAAGGACAATTTTCGGTGAAATCTGATGTCTTTAGTTTTGGCGTACTGCTTCTTGAGATCGTAAGTGGCCAGAAAAACAGTGGCATTCGTCTTGGGGAGAATGTAGAAGATCTACTGAGCTTCGTAAGTGTTACTTTCTCCATATATATTATTTTCTTTAGAAGAGCATATGCTCCAGAACATTGGTGGAACCAGCCACTTAATAACAAAGTTTTGCAGACATGGAGAAACTGGAGGGAGGGGACAGCTGTAAACATCTTAGATCCATCATTAAACAACAATTCGCGAAGTGAAATGATGAGATGCATCCATATTGGTTTGCTTTGTGTTCAAGAAAATTTAACTGACAGACCAACCATGGCGACCATCATGCTCATGCTCAATAGCGAATCTATCAGTCTCCCCATTCCTTCTGAACCTGCATTTTATGTGAACAGTACAACTAGAAGCCTTCCAGCCGCGCTCTCATGGGGGCATAGTTCCACGGCAACAAGATCAACCGAATCGACAATCAAATATTCTCAGGAATCAGAAAATGAGGCTTCAATCACTCAGCCGTACCCTCGCTAG 591 0.4247 MAPEYIMQGQFSVKSDVFSFGVLLLEIVSGQKNSGIRLGENVEDLLSFVSVTFSIYIIFFRRAYAPEHWWNQPLNNKVLQTWRNWREGTAVNILDPSLNNNSRSEMMRCIHIGLLCVQENLTDRPTMATIMLMLNSESISLPIPSEPAFYVNSTTRSLPAALSWGHSSTATRSTESTIKYSQESENEASITQPYPR 196
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01212 196 MobiDBLite consensus disorder prediction 163 196 - -
Spst10g01212 196 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 193 - -
Spst10g01212 196 Pfam Protein tyrosine and serine/threonine kinase 1 33 IPR001245 GO:0004672|GO:0006468
Spst10g01212 196 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Spst10g01212 196 SUPERFAMILY Protein kinase-like (PK-like) 1 160 IPR011009 -
Spst10g01212 196 ProSiteProfiles Protein kinase domain profile. 1 149 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01212 Spst-Chr10 12907766 12908356 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01212 1 196 Receptor kinase-like Gene Family AT4G21410 43.434 2.59e-42 148
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Spst10g01212 PK_Tyr_Ser-Thr 2.2e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01212 - - var:108324785 240.736