Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01211 ATGGCACCAGAGTATGCAATGCATGGACAATTTTCAGTAAAATCGGACGTCTTCAGTTTTGGTGTACTTCTTCTTGAGATTGTAAGTGGCCAGAAAAACAGTGGAATCAACAATGGGGAGAATATGGAGGATCTAATAAGCTTCGCATGGAGAAACTGGAAGGAGGGAACAGCAATAAATATTGTAGATCCATCACTCAGCAACAATTCACGGAATGAAATGATGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAGAATTTATCTGACAGACCAACCATGGCTAACATTATACTGATGCTTAACAGCTATTCTCTGAGTCTCCCAGTTCCTGCAGAACCAGCATTTTATATGAACAGTAGAACTAGAATCCTCCCAGAGATGCAGTCATGGGAGTATAATTCAAGAGAAACAGGATCAAGTGAGAGGATACTTAAATCAGCTCAAGAATCAGAAAATGAAGCTTCAATTACTGACCTACACCCTCGCTAG 495 0.402 MAPEYAMHGQFSVKSDVFSFGVLLLEIVSGQKNSGINNGENMEDLISFAWRNWKEGTAINIVDPSLSNNSRNEMMRCIHIGLLCVQENLSDRPTMANIILMLNSYSLSLPVPAEPAFYMNSRTRILPEMQSWEYNSRETGSSERILKSAQESENEASITDLHPR 164
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01211 164 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 162 - -
Spst10g01211 164 SUPERFAMILY Protein kinase-like (PK-like) 1 135 IPR011009 -
Spst10g01211 164 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 1 107 - -
Spst10g01211 164 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
Spst10g01211 164 ProSiteProfiles Protein kinase domain profile. 1 106 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01211 164 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Spst10g01211 164 MobiDBLite consensus disorder prediction 143 164 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01211 Spst-Chr10 12882988 12883604 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01211 1 164 Receptor kinase-like Gene Family AT4G21410 51.807 1.55e-53 177
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01211 PK_Tyr_Ser-Thr 8.1e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01211 - - vra:106771832 306.219