Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01207 ATGGCACCTGAGTATGCAAATTATGGACATTTCTCAGTGAAATCAGATGTTTTTAGCTTTGGTGTACTAGTTCTTGAGATAGTGTCTGGACTCAAAAATAGTGATATCCGTGACGGCGATTATGCAGAACATCTAATAAGCTTTGCATGGAGGAACTGGAGAGAAGGGACAGCCTTTAATATTGTAGATCAAACACTGCACAATAATTCAAGAGACGAAATAATGAGATGCATCCATATTGGATTACTGTGTGTTCAAGAAAACGTAACCAGCAGACCAACTATGGCAACAGTTGTAATCATGTTTAACAGTAACTCTTTCACTCTTCCATTACCCTCACAACCTGCATATTCTCTGAATGCCAGAGATCCACCGGATACAAGCTCAGATGAGTCAAGGATTAACTCCATGCAAGCATCAGCAAATGAGGCTTCCATTAGCGAGTTAGATCCTCGCTAG 459 0.4052 MAPEYANYGHFSVKSDVFSFGVLVLEIVSGLKNSDIRDGDYAEHLISFAWRNWREGTAFNIVDQTLHNNSRDEIMRCIHIGLLCVQENVTSRPTMATVVIMFNSNSFTLPLPSQPAYSLNARDPPDTSSDESRINSMQASANEASISELDPR 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01207 152 MobiDBLite consensus disorder prediction 117 152 - -
Spst10g01207 152 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 1 131 - -
Spst10g01207 152 MobiDBLite consensus disorder prediction 117 145 - -
Spst10g01207 152 Gene3D Transferase(Phosphotransferase) domain 1 1 108 - -
Spst10g01207 152 SUPERFAMILY Protein kinase-like (PK-like) 1 138 IPR011009 -
Spst10g01207 152 Pfam Protein tyrosine and serine/threonine kinase 1 99 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01207 Spst-Chr10 12851701 12852235 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01207 1 152 Receptor kinase-like Gene Family AT4G21410 53.896 3.43e-49 165
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01207 PK_Tyr_Ser-Thr 1.1e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01207 - - gsj:114402114 242.662