Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01203 ATGTTTGTTTCCCGCGACTATGTTACTTGTTCTTTGCTCTTATTATCCATACAAGCAATTGCTTCATCGTTAGCTCTCAATTACAACGCTAATTACTGTCCAACCAACACAGCGCACCAATTCAACACTGAATTCCAAACAAATCTCCGAATCCTCCTCACTTCTCTCACCTCCAACGCCTCCTTGGGCCGCGACGTCTCCTACCAAACCATCCTTGGAATGACGTCCCCAGACGTCGCCGCCGGCATCTTCCTTTGCCGCGGTGACGTCTCCGCCGCCACGTGTAAGGAATGCGTGGCCACCGCCGCCATAGAAATAACAAGCCGCTGCCACAACCAAACGGAGTCCATCATATGGTACGACGAGTGTATGGTGGCCTACACAAACGACTGGTTCGACCCCATGGGCATGGACCCGAAAGTGAACTTGTGGGAGAATAAGAGCGTCTCCGCCTCGGATTTCGAAAACTTTAACCAAACGTTGTTGGGGTTGTTGAACGGTTTGGCTGAGGATGCTGCGAGTTCGAAGAAATTCGCGACAGGGGAAGCGGCGGTAAAGGTTGGTTCTTCGGGGCACGTCTACGGCTTGGTGCAGTGCGTGCCCAGCGCCACGAATGATCAGTGCGAGACGTGTTTGAAAAATGGTATTGGAACTCTCTTTTCTGCGTGTTGTGAAGGAAAACAGGGCGCAAGAGCTCTGCTTGCATGGTGTAATATCAGATACGAGTTGTTTCAGTTTTACAACACAGCAGTGACGCCAACAGCGCCACTGGTTCCTTCTCCTTCAGTTGTTCTTGTGCATTTTCTAATATTGATGTTGTTAAACAGTGGTTACATGGCACCAGAATACGTAAAACGGGGACACTTTTCAGAAAAATCAGATGTCTTCAGTTTTGGAGTCATCATTTTGGAAGTTCTTAGTGCAAAAAGGAATGTTTGTCCTACTGTACCATCAACCAGTGATGATGAAGACGAAGATCTTTTGAGTTATGTGAATTTGGAGGCAATGGAGGAATGA 1017 0.4808 MFVSRDYVTCSLLLLSIQAIASSLALNYNANYCPTNTAHQFNTEFQTNLRILLTSLTSNASLGRDVSYQTILGMTSPDVAAGIFLCRGDVSAATCKECVATAAIEITSRCHNQTESIIWYDECMVAYTNDWFDPMGMDPKVNLWENKSVSASDFENFNQTLLGLLNGLAEDAASSKKFATGEAAVKVGSSGHVYGLVQCVPSATNDQCETCLKNGIGTLFSACCEGKQGARALLAWCNIRYELFQFYNTAVTPTAPLVPSPSVVLVHFLILMLLNSGYMAPEYVKRGHFSEKSDVFSFGVIILEVLSAKRNVCPTVPSTSDDEDEDLLSYVNLEAMEE 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01203 338 ProSiteProfiles Gnk2-homologous domain profile. 137 246 IPR002902 -
Spst10g01203 338 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 26 132 - -
Spst10g01203 338 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 13 254 - -
Spst10g01203 338 Gene3D - 26 132 IPR038408 -
Spst10g01203 338 Gene3D - 140 246 IPR038408 -
Spst10g01203 338 Pfam Salt stress response/antifungal 33 129 IPR002902 -
Spst10g01203 338 Pfam Salt stress response/antifungal 152 242 IPR002902 -
Spst10g01203 338 Gene3D Transferase(Phosphotransferase) domain 1 260 338 - -
Spst10g01203 338 SUPERFAMILY Protein kinase-like (PK-like) 269 311 IPR011009 -
Spst10g01203 338 ProSiteProfiles Gnk2-homologous domain profile. 27 132 IPR002902 -
Spst10g01203 338 Pfam Protein tyrosine and serine/threonine kinase 277 315 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01203 Spst-Chr10 12805938 12808317 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01203 277 331 Receptor kinase-like Gene Family AT4G05200 47.368 4.62e-08 52.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01203 Stress-antifung 5e-14 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01203 - - gsj:114402923 275.018