Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01201 ATGCGTGGGCAGTTTTCTGTGAAATCAGATGTTTTCAGCTTTGGTGTATTGGTTTTGGAGATTGTGAGTGGCAAGAAGAATACTGATTTTTATCAATCGAATCACGCTGATGACCTCTTAAGCTTTGCTTGGAAGAAATGGACAGAGCAAACAGTTATGGAATTTCTGGATCCAACTCTGAGAAGTTCTTGTTCCAGAAATGAAGTAAATAGATGCATCCATATTGGTTTATTATGTGTTCAGGAAAATCCATCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGTTATTCGGTTACCATGTCAATTCCACAACAACCAGCATCTTTTCTGCGAGGAAGAAGTCCTAACAGCCTAAACTGGGGGCTTGACTCTGATCAGTCTACCACCGCTCAGTTGACCTCCAGTTCAATTCCATGGTCTGTGAATGAGGTATCCATCACTGAAGTATGCCCTCGCTAA 471 0.4204 MRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNHADDLLSFAWKKWTEQTVMEFLDPTLRSSCSRNEVNRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTMSIPQQPASFLRGRSPNSLNWGLDSDQSTTAQLTSSSIPWSVNEVSITEVCPR 156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01201 156 Pfam Protein tyrosine and serine/threonine kinase 3 94 IPR001245 GO:0004672|GO:0006468
Spst10g01201 156 Gene3D Transferase(Phosphotransferase) domain 1 1 110 - -
Spst10g01201 156 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 152 - -
Spst10g01201 156 SUPERFAMILY Protein kinase-like (PK-like) 3 124 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01201 Spst-Chr10 12784529 12785137 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01201 1 156 Receptor kinase-like Gene Family AT4G23140 50.641 4.85e-50 168
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01201 PK_Tyr_Ser-Thr 4.2e-10 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01201 - - vun:114191833 280.796