Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01200 ATGGCGCTTGCTTCCTACGTCAAAGGGCAAGCAATAAATACACCAATTCTTTTGTCCATGACTCAAGGTGTCTTCCCCAACGGACAGGAGATAGCAGTTAAAAGGTTGTCAGTTACCTCCTGGCAGGGTGCAGTAGAATTCAGGAATGAAGCTGGCCTTGTGGCCAAGCTTCAGCACAGAAATTTAGTAAGACTTTTGGGATTTTGCTTGGAGGGACAGGAGAAGATCCTTATCTATGAATACATAAACCCTGCAAAGCGCACAGATTTTGGAGATTGTGAGTGGCAAGAAGAAACTGATTTATATCAATCGGAACAAGCTGATGACCTCCCTAATCTGGCTTGGAAGAATTGGACAGAGCAAACACCTATGGAGTTTCTAGATCCAACACTGAGAGGTTCTTATTCAAGAAATGAAGTAAAGAGATGCATCCATATCGGCTTATTATGTGTTCAGGAAAATCCATCTGACAGACCATCAATGGCCACCATTGCACATATGCTGAACAGTTATTCAGTTACCACCAGTAAAATTCCATGGTCTGTGAATGAAGTATCTATTACGGAATTATACCCCCGCTAA 582 0.4244 MALASYVKGQAINTPILLSMTQGVFPNGQEIAVKRLSVTSWQGAVEFRNEAGLVAKLQHRNLVRLLGFCLEGQEKILIYEYINPAKRTDFGDCEWQEETDLYQSEQADDLPNLAWKNWTEQTPMEFLDPTLRGSYSRNEVKRCIHIGLLCVQENPSDRPSMATIAHMLNSYSVTTSKIPWSVNEVSITELYPR 193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01200 193 Gene3D Transferase(Phosphotransferase) domain 1 79 183 - -
Spst10g01200 193 Pfam Protein tyrosine and serine/threonine kinase 28 83 IPR001245 GO:0004672|GO:0006468
Spst10g01200 193 FunFam Uncharacterized protein 16 81 - -
Spst10g01200 193 PANTHER RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD1-8 109 174 - -
Spst10g01200 193 SMART tyrkin_6 7 168 IPR020635 GO:0004713|GO:0006468
Spst10g01200 193 Gene3D Phosphorylase Kinase; domain 1 8 78 - -
Spst10g01200 193 SUPERFAMILY Protein kinase-like (PK-like) 26 174 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01200 Spst-Chr10 12779147 12781239 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01200 19 93 Receptor kinase-like Gene Family AT4G21400 66.234 1.49e-26 103
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01200 PK_Tyr_Ser-Thr 2.9e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01200 - - gsj:114402115 162.54