Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01199 ATGTCCCCGGAATATGCAATGCGTGGACAATTTTCTGTGAAATCAGATGTATTCAGCTTTGGTATCTTAGTTTTGGAGATTATGAGTGGCAAGAAGAGAACTAATTTATATCAATCGGAACACGCTGATGACCTCTTAAGTCTTGCTTGGAAGAATTGGACAGAGCAAACACCTATGGAATTTCTGGATCCAACACTTAGAGGTTCTTGTTCAAGAAATGAAGTAAATAGATGCATCCAGATCGGTTTATTATGTGTTCAGGAAAATCCATCTGACAGACCATCAATGGCCACCATTGCACTTATGCTGAACAGCTATTCGGTTACCATGTCAATGCCACGACAACCAACATCTTTTCTTCGTGGAAGAAGTCCTGACAGGCTATGCCGACGGCTTGAATCTGATCAGTCTACCACCGATCGGTCTACCACCAGTTCAATTCCATGGTCTGTGAATGAAATATCCATTACGGAATTACACCCTCGCTAA 489 0.4192 MSPEYAMRGQFSVKSDVFSFGILVLEIMSGKKRTNLYQSEHADDLLSLAWKNWTEQTPMEFLDPTLRGSCSRNEVNRCIQIGLLCVQENPSDRPSMATIALMLNSYSVTMSMPRQPTSFLRGRSPDRLCRRLESDQSTTDRSTTSSIPWSVNEISITELHPR 162
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01199 162 ProSiteProfiles Protein kinase domain profile. 1 107 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01199 162 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 162 - -
Spst10g01199 162 Pfam Protein tyrosine and serine/threonine kinase 1 100 IPR001245 GO:0004672|GO:0006468
Spst10g01199 162 Gene3D Transferase(Phosphotransferase) domain 1 1 117 - -
Spst10g01199 162 SUPERFAMILY Protein kinase-like (PK-like) 1 129 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01199 Spst-Chr10 12772520 12773141 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01199 1 162 Receptor kinase-like Gene Family AT4G23140 50.617 2.50e-51 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01199 PK_Tyr_Ser-Thr 4e-11 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01199 - - vun:114191833 277.715