Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01196 ATGCTTGGACAATTTTCTGAAAAGTCAGATATTTTTAGTTTCGGAATCATCGTTCTCGAAATTATTACAGGCAAAAAGAATGCGAATTCTTATGAATCACAGCATGCGGAGGAAGGTCTCATGACTCATGTGTGGAGACATTGGAAGAATGAAACAGCAATGAGTATATTGGATCCAAATATGAAAGAAAATGATTATGAAAGTGAAGTGATTCGATGCATTGAAATTGGTTTATTATGTGTTCAAGAGAATCCAAATGTGAGACCTAGTATGGCAGCAGTTGTTTCATATCTTAATAATCATTCACTTGAACTGCCATCTCCTCAAGAACCTGCCTTTTTCTTACACGGGATGGACAAAAAAGTAGTTACACAGGAAGGATCAAGTTCCAGCATATCTGCCAACAGTTCCATGCCATTCTCTGTCAATGAAATGTCTGCAAGTAATTTTTATCCACGATAA 462 0.3658 MLGQFSEKSDIFSFGIIVLEIITGKKNANSYESQHAEEGLMTHVWRHWKNETAMSILDPNMKENDYESEVIRCIEIGLLCVQENPNVRPSMAAVVSYLNNHSLELPSPQEPAFFLHGMDKKVVTQEGSSSSISANSSMPFSVNEMSASNFYPR 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01196 153 SUPERFAMILY Protein kinase-like (PK-like) 4 138 IPR011009 -
Spst10g01196 153 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 1 148 - -
Spst10g01196 153 Gene3D Transferase(Phosphotransferase) domain 1 1 109 - -
Spst10g01196 153 Pfam Protein tyrosine and serine/threonine kinase 4 98 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01196 Spst-Chr10 12726757 12727355 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01196 1 153 Receptor kinase-like Gene Family AT4G23140 44.444 1.15e-40 142
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Spst10g01196 PK_Tyr_Ser-Thr 2.4e-07 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01196 - - vum:124825842 255.758