Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01168 ATGGAAGACTTTTTGGGCTCTCTTCGCCGCTCCCTTGTTCTCCGACCAGGCGGCGTCGATGCTCCTTTTGCGGGAATCGCCGACAAGCTTGGCTCCGCCATTCGCAAGTCGCGAATCGCATTCAAACCTCCTCCTCCTCCTCCTCCCATACGGTGGCGCAAGGGCCAGTTGATCGGTTCGGGCGCCTTTGGTCACGTCTACATGGGAATGAACCTCGATTCCGGGGAGCTTATTGCCATCAAACAGGTTTTAATCGCGCCTGGTAGCGCTTACAAGGGGAATACACAGCTTCGTGGAAGTGTTTCTAGTGGTCATTATGTGGATGAGTGTCAGGCTAATATTCGGGAGCTCGAAGAAGAAGTCAAGCTTCTCAAGAATCTTAAGCATCCAAATATTGTTAGATACTTGGGAACTGCCCGAGAGGAGAATTCCTTAAATATTCTGCTGGAGTTTGTACCTGGTGGTTCTATCTCATCACTTTTGGGGAAATTCGGATCCTTCCCTGAATCCGTTATAAGAATGTATACAAAACAGCTTTTACTGGGCCTTGAATACCTTCATAATAATGGGATTATTCACAGAGATATTAAGGGAGCCAACATTCTAGTTGATAACAAAGGGTGCATTAAACTTGCAGACTTTGGTGCATCCAAGAAAGTTGTTGAACTGGCTACCATCAATGGTGCAAAATCAATGAAGGGCACACCACATTGGATGTCCCCTGAAGTTATTCTACAAACAGGACATACGATCTCCACTGATATATGGAGTGTTGCATGCACTGTGATAGAGATGGCCACGGGAAAGCCTCCATGGAGTCAACAGTATCCCCAGGAGGTTTCAGCTATTTTCTATATTGGGACAACTAAATCTCATCCACCCATACCTGAACATCTGTCTCCTGAGGCAAAGGACTTTTTGCTGAAATGCTTCCACAAGGAGCCAGATTTAAGGCCTTCCGCATCAGAATTGTTACAGATCAAGATTCAGAATTCTCAACTTGCCTATGAGTTCATGAAACCAGACACTAGGGAGGGCGAATACATATGCATCCGTTCATCACCTATGACTATCATGGATCTCATTCAATATTACGCAGTTCATTCAGGGTTGGTGTCCACGTTCTTGGATTCTGTTCAGGGATCAACTTGCACAGGCTTGAAGGATGTTTGTCAGATAGATAGCAGAAGGTTCTCAACTGTATATCATAAATCAGATTCCTACCAGAGATCAGACAACAATGATGATGACATGTGTCAAATGGATGAAGATGATTTTTTGATTGATTCATCAGCAAAATCTGAATCTCTATTAGCTTCTGATACGAAGAGTTGCAATCCTTTGTACAAACCTGTGGATGACCGGCCTTGCAATTTTAACGAAACCCAATATTTAGAGAAAAGCAGACCGAACTTGTCATTTTCAAGTGAGCCTGTAGGAGCTGAAGATGATGAAGAGCTTACTGAATGTAAAATTAGAGACTTCCTTGATGCCAAGGCCCTTGAACTGAAGAAGCTCCAAACACCTCTTTATGAAGAATTCTTTAACATATCAAATGCCGCCATTGCACATGCTCCCATTGCAGTTGCAAAGAGTAAAGTTATTTCCGGTGACCCAAATGTAACATCAAAAGTCAGATCTCCTAGTCAGGCTTGGAGACGATTCTCAATGGCTGGAAGTGCTACTGTAGCAAGCCCTGGGAGTCATACCAAATTCCGATCGAAGCTTAGTGGTGCTCATTGTCAACCTTTGCAAGAAATTCAGCCTCCTGAGCTTAATGAATCAAAGGAGACTCTTCATGATGCTGAGCCAGAATCATCTATTGTAAGCTCAAACTTTTCTGAGAGGCAAAGGAAATGGAAAGAAGAATTGGTTGAAGAGCTTGAGTGGAAACGAGAGATGATCCGTCGGGCCGGAATTGGAGGAAAGATAACATCTCCAAAAAATCGCAAATTTTATGGAGACTGA 1968 0.438 MEDFLGSLRRSLVLRPGGVDAPFAGIADKLGSAIRKSRIAFKPPPPPPPIRWRKGQLIGSGAFGHVYMGMNLDSGELIAIKQVLIAPGSAYKGNTQLRGSVSSGHYVDECQANIRELEEEVKLLKNLKHPNIVRYLGTAREENSLNILLEFVPGGSISSLLGKFGSFPESVIRMYTKQLLLGLEYLHNNGIIHRDIKGANILVDNKGCIKLADFGASKKVVELATINGAKSMKGTPHWMSPEVILQTGHTISTDIWSVACTVIEMATGKPPWSQQYPQEVSAIFYIGTTKSHPPIPEHLSPEAKDFLLKCFHKEPDLRPSASELLQIKIQNSQLAYEFMKPDTREGEYICIRSSPMTIMDLIQYYAVHSGLVSTFLDSVQGSTCTGLKDVCQIDSRRFSTVYHKSDSYQRSDNNDDDMCQMDEDDFLIDSSAKSESLLASDTKSCNPLYKPVDDRPCNFNETQYLEKSRPNLSFSSEPVGAEDDEELTECKIRDFLDAKALELKKLQTPLYEEFFNISNAAIAHAPIAVAKSKVISGDPNVTSKVRSPSQAWRRFSMAGSATVASPGSHTKFRSKLSGAHCQPLQEIQPPELNESKETLHDAEPESSIVSSNFSERQRKWKEELVEELEWKREMIRRAGIGGKITSPKNRKFYGD 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01168 655 PANTHER MAP KINASE KINASE KINASE SSK2-RELATED-RELATED 46 337 - -
Spst10g01168 655 FunFam Mitogen-activated protein kinase kinase kinase 2 51 348 - -
Spst10g01168 655 ProSitePatterns Protein kinases ATP-binding region signature. 58 81 IPR017441 GO:0005524
Spst10g01168 655 MobiDBLite consensus disorder prediction 595 616 - -
Spst10g01168 655 Gene3D Transferase(Phosphotransferase) domain 1 51 349 - -
Spst10g01168 655 SMART serkin_6 52 335 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01168 655 ProSiteProfiles Protein kinase domain profile. 52 339 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01168 655 Pfam Protein kinase domain 53 326 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01168 655 Coils Coil 107 127 - -
Spst10g01168 655 ProSitePatterns Serine/Threonine protein kinases active-site signature. 191 203 IPR008271 GO:0004672|GO:0006468
Spst10g01168 655 SUPERFAMILY Protein kinase-like (PK-like) 51 343 IPR011009 -
Spst10g01168 655 CDD STKc_MAPKKK 51 326 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01168 Spst-Chr10 12429846 12442888 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01168 1 643 MAP Kinase Kinase Kinase AT3G06030 51.895 0.0 587
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK STE_STE11 Spst10g01168 Pkinase 7.9e-65 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01168 K20606 - gmx:100795863 984.556