Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01163 ATGTCTGTTCTGGTAGAATGCATAAGCAATAGGGAGGCAAAACATGTCAGGTCGCGCGGGCCGGACCTCCAGCCCATCACGGCGGGTCGGACTTCAGCCAATGCCAATACGGAGCCACCCTCCCTCGACAATCCCGAAACATTGGTTTCATCCAGAGACATAGTAATCTCCGAAAACCCCTCCATCTCCGCGCGCGTGTACCTCCCGAAACTCTACTCCCACACCGCCGAAAAGATCCCAATCCTGGTGTACTTCCACGGCGGTGCGTTCTGCCTCGAATCCGCGTTCTCCTTTCTCCACCACCGCTACCTCAACATCGTAGCTTTCAAAGCCAAGGTTCTCGTAGTTTCCGTGGGGTACAGGCTCGCCCCAGAGAACCCTCTTCCCGCAGCGTATGAAGATAGCTCGGAAGCTCTCAAATGGGTAACCTCTCATTCTAACAACACCAACGTTGAACCATGGTTGATAAACCACGGTGATTTTAACAGGTTTTACATAGGAGGTGACACTGCAGGTGCCAATATTGCACACAATGTAGTTCTTCGTGTGGGTGTTGAGAGTGAGGGTTTACTTGGCGGTGTGAAGATAGGGGGTGTGCTCAGGTTTGTGTACCTTGATGCACCACGTGGAATTGATAACCCTTTGATCAATCCTTTGGCTGGTGGGGCTCCTAGCTTGGCCTCCCTTGGTTGCTCGAAGATGTTGATTTTTGTGGCGGGGAAGGATGATCTTAGGGACAGAGGAATTTGGTACTATGATGCTTTTAAGGAAAGTGGGTGGAAGGGTGACGTGGAACTGGTCGAAGTGGAGGGAAAGGAACACTGTTTTCAGATTTATCATCCTGAAACTGAGAATTCTAAGAACATGATCACCCGCATGGCTTCTTCTTGTTTGAACACCGCATACTTTGTGGATTAG 918 0.5044 MSVLVECISNREAKHVRSRGPDLQPITAGRTSANANTEPPSLDNPETLVSSRDIVISENPSISARVYLPKLYSHTAEKIPILVYFHGGAFCLESAFSFLHHRYLNIVAFKAKVLVVSVGYRLAPENPLPAAYEDSSEALKWVTSHSNNTNVEPWLINHGDFNRFYIGGDTAGANIAHNVVLRVGVESEGLLGGVKIGGVLRFVYLDAPRGIDNPLINPLAGGAPSLASLGCSKMLIFVAGKDDLRDRGIWYYDAFKESGWKGDVELVEVEGKEHCFQIYHPETENSKNMITRMASSCLNTAYFVD 305
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01163 305 MobiDBLite consensus disorder prediction 16 44 - -
Spst10g01163 305 Gene3D alpha/beta hydrolase 13 297 IPR029058 -
Spst10g01163 305 MobiDBLite consensus disorder prediction 25 44 - -
Spst10g01163 305 PANTHER ARYLACETAMIDE DEACETYLASE 30 284 - -
Spst10g01163 305 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 82 98 IPR002168 GO:0016787
Spst10g01163 305 Pfam alpha/beta hydrolase fold 203 277 IPR013094 GO:0016787
Spst10g01163 305 Pfam alpha/beta hydrolase fold 82 186 IPR013094 GO:0016787
Spst10g01163 305 SUPERFAMILY alpha/beta-Hydrolases 33 294 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01163 Spst-Chr10 12333173 12341015 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01163 39 294 Carbohydrate Esterase AT1G19190 36.842 1.98e-57 186
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01163 - K13258 gmx:100785409 401.364