Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01161 ATGGCTTCCACAACCAACGATGCCAAACAGATCCTTACCGAGATTCCGGAGTGGATCCGCGTCTTCACTGACGGGACCGTGGAACGCCCACGCGATTTTCCGATCGTTCCACCCACCCTCCATGACTCTAACACTGGAGTCTCGTCCAAGGACATTGCAATCTCAAACAACCCTCCAAAACCAATCTCTGCCCGCATTTACCTCCCACACATCACCGATTCCCAGACTCACAAACTTTCCATCTACGTCTACTTTCACGGGGGTGGCTTCTTCTTCGAATCCGCTTTCTCCAAACTCTTCAACCACCATTTCCTCAACTTGGTTTCTCAGGCAAAAGTTTTAGTGGTTTCCGTAGAATACAGACTCGCCCCGGAGCACCCTCTCCCTGCAAGTTACGATGATTCTTGGGATGCTCTCAAATGGGTTGCATCACATTCTAACACTACCAACTACCCCACCCTTAACACTGACCCATGGTTGATTCACCACGCTGACTTCAACAGACTGTTCATAGGAGGAGACAGTGCTGGTGCCAACATCGTCCATAACATTCTTGTCTTTCGTCAGCCTTTGCCTGGGGATGTTAAAATACTGGGCGCTATTATGGCGCATCCTTATTTCTATGGCTCGCAGCCTGTAGGCTCTGAACCTGTAACCGGGCTCGACCAGAACTTCTACAATCTGGTTTGGAAGTTGGTGTACCCATCTGCACCGGGTGGCATTGATAACCCCTTCATTAACCCTCTGGCTGCTGGGGCTCCTAGCCTGGCTCAACTTGCTTGTTCTAGAATCTTGGTTTGTGTTGCTGAAAAGGATGGGTTGAGGGACAGAGGTGTCTGGTATTATGAGGCTGTGAAGAAGAGTGGGTGGCAAGGCCAAATTCAACTCTTTGAAGAGAAAGATGAGGATCATGATTACCATTTGCTCAAACCTTCACTCAATCAAGATACTCGTAATGCTCACAAATTGATCAACCTCATGGCTTCTTTTCTCGTTAACTAG 1002 0.486 MASTTNDAKQILTEIPEWIRVFTDGTVERPRDFPIVPPTLHDSNTGVSSKDIAISNNPPKPISARIYLPHITDSQTHKLSIYVYFHGGGFFFESAFSKLFNHHFLNLVSQAKVLVVSVEYRLAPEHPLPASYDDSWDALKWVASHSNTTNYPTLNTDPWLIHHADFNRLFIGGDSAGANIVHNILVFRQPLPGDVKILGAIMAHPYFYGSQPVGSEPVTGLDQNFYNLVWKLVYPSAPGGIDNPFINPLAAGAPSLAQLACSRILVCVAEKDGLRDRGVWYYEAVKKSGWQGQIQLFEEKDEDHDYHLLKPSLNQDTRNAHKLINLMASFLVN 333
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01161 333 PANTHER ARYLACETAMIDE DEACETYLASE 15 314 - -
Spst10g01161 333 Pfam alpha/beta hydrolase fold 83 307 IPR013094 GO:0016787
Spst10g01161 333 Gene3D alpha/beta hydrolase 18 333 IPR029058 -
Spst10g01161 333 SUPERFAMILY alpha/beta-Hydrolases 12 331 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01161 Spst-Chr10 12327934 12328935 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01161 20 331 Carbohydrate Esterase AT1G19190 40.252 2.16e-71 223
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01161 - - vum:124847336 580.482