Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Spst10g01122 | ATGCCCAGCCTGTTCTCCAAACACCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCATCCTCCACCATCCACCGACAACTCCACCACCTTCTCCCACCCCACGTCATCCTCCGCCGATTCCTCCTCCACGGAGCCTGACTTCGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCTTCCCCGGGCACCTCCAACTCCATCGTGGAGTCCCCCGACACCCGCACCTTCCTCCCTACCGCCGGCGGCGTCAGAGTCCCCAAGTACTCCCTCAACCCCTACGTCGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAAGTCTTAGACATCACCAAAGACTGGGACTACCTCCACGAACTTCTGCTATGCTACCTCGCTCTCAACCCCACTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTTCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCACCACCACCACCGGCGCCACCGTAGCTTCTCAGGAAACTTGCTCTAA | 540 | 0.5833 | MPSLFSKHLHLCFFKLKYPTILHHPHPPPSTDNSTTFSHPTSSSADSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFLPTAGGVRVPKYSLNPYVDFLRSMHEMIRSRQVLDITKDWDYLHELLLCYLALNPTHTHKYIIRAFTDLVLQLLSSTPCRTHHHHRRHRSFSGNLL | 179 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Spst10g01122 | 179 | ProSiteProfiles | OVATE domain profile. | 92 | 155 | IPR006458 | - | |
Spst10g01122 | 179 | MobiDBLite | consensus disorder prediction | 27 | 50 | - | - | |
Spst10g01122 | 179 | NCBIfam | uncharacterized plant-specific domain TIGR01568 | 92 | 158 | IPR006458 | - | |
Spst10g01122 | 179 | PANTHER | TRANSCRIPTION REPRESSOR OFP7-RELATED | 38 | 157 | IPR038933 | GO:0045892 | |
Spst10g01122 | 179 | MobiDBLite | consensus disorder prediction | 25 | 50 | - | - | |
Spst10g01122 | 179 | Pfam | Transcriptional repressor, ovate | 96 | 156 | IPR006458 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Spst10g01122 | Spst-Chr10 | 11967403 | 11967942 | Wgd |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
TF | OFP | Spst10g01122 | Ovate | 2.4e-22 | No_clan |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Spst10g01122 | - | - | gmx:102666896 | 280.796 |