Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01122 ATGCCCAGCCTGTTCTCCAAACACCTTCACCTCTGTTTCTTCAAGCTCAAATACCCCACCATTCTCCACCACCCTCATCCTCCACCATCCACCGACAACTCCACCACCTTCTCCCACCCCACGTCATCCTCCGCCGATTCCTCCTCCACGGAGCCTGACTTCGCCTCCGTCTTCGCCTCCCAGCGCTTCTTCTTCTCTTCCCCGGGCACCTCCAACTCCATCGTGGAGTCCCCCGACACCCGCACCTTCCTCCCTACCGCCGGCGGCGTCAGAGTCCCCAAGTACTCCCTCAACCCCTACGTCGATTTCCTCCGCTCAATGCACGAAATGATCCGTTCACGCCAAGTCTTAGACATCACCAAAGACTGGGACTACCTCCACGAACTTCTGCTATGCTACCTCGCTCTCAACCCCACTCACACCCACAAGTACATCATTCGCGCCTTCACCGACCTTGTTCTCCAACTCCTCTCCTCCACCCCCTGTCGGACGCACCACCACCACCGGCGCCACCGTAGCTTCTCAGGAAACTTGCTCTAA 540 0.5833 MPSLFSKHLHLCFFKLKYPTILHHPHPPPSTDNSTTFSHPTSSSADSSSTEPDFASVFASQRFFFSSPGTSNSIVESPDTRTFLPTAGGVRVPKYSLNPYVDFLRSMHEMIRSRQVLDITKDWDYLHELLLCYLALNPTHTHKYIIRAFTDLVLQLLSSTPCRTHHHHRRHRSFSGNLL 179
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01122 179 ProSiteProfiles OVATE domain profile. 92 155 IPR006458 -
Spst10g01122 179 MobiDBLite consensus disorder prediction 27 50 - -
Spst10g01122 179 NCBIfam uncharacterized plant-specific domain TIGR01568 92 158 IPR006458 -
Spst10g01122 179 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 38 157 IPR038933 GO:0045892
Spst10g01122 179 MobiDBLite consensus disorder prediction 25 50 - -
Spst10g01122 179 Pfam Transcriptional repressor, ovate 96 156 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01122 Spst-Chr10 11967403 11967942 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Spst10g01122 Ovate 2.4e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01122 - - gmx:102666896 280.796