Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01103 ATGTTCTCTTCCACATATGACTCCAACCTTTTCCCAAACTTCCCTTCCTCCTCTTACCCTATTCTTCCTTTTCTCATTGATCCTGAAAATGATTTTGCAAGCAACACCCTTCTTGATGACCCTCTTCTTGTTCCCTTCATACCCACCACTCATGATCCTCCATTCCCTGAAGAAACTGTTGCCAATTTTGCAGTTGCTGACTGTACTGCCATGCTTGAACAGGATGCAAACACTAACTACGGTTCCCACTATGGTGGCATTTCCAATTTTCTGACCCAGAAACCAGCCATAGCCAAGAAAGACAGGCATAGTAAGATTCACACATCTCAGGGTTTGAGAGACCGCAGGGTGAGATTATCAAGCGAAATAGCCCGCAAGTTCTTTGATCTTCAGGACATGTTAGAGTTTGACAAACCAAGTAACACCCTTGAGTGGCTTTTCACAAAGTCAGAGAATGCGATCAAAGAACTAGCCCAAAGTAAGCATAGCGGCAGTATCAGTGGGGGTGACAAGTGTTCCCGCGACGCTTCTGTGGATTCAAATAACAATAAATCATTGGCGGGTAGTGGGGGTGATGGTTCTAAAGGGAGGAAGTCAAAATGGGCACAGAAGGATGATGTTTGCGTTCAGACCAAAAAGGAGTCAAGGGAAAGGGCAAGGGCAAGAGCAAGAGAAAGGACTTGTTACAAGATGTGTAGCAATAGAAGGGTGCAGCAAGACTTCGATGAAAGATGCCCTGCAACTGGAAACACTCAAATGCTGCACCAATTGAGGTCATCCATTCAACCTGAACCAGAAGCTTGCGCGAGATGGGTTCAGCCTTATAACCCTTATCTCATTCATAGTGAAGCACCGAGAGATGGATTTGACGTCATTGAAGAATCTATTATGATAAAGAGGAACATGAAGCAGTCATCTATGATGGCTTCTCATCACCAAAACCAAAGCCAAAACCTTGTGATCCCTAGGGATGCAACTTTCAACAACACTGTGTGCCCCTTGTTACCCTATTCCTCTCCAGACTGGGACAGTAATGGGGCCGTTAGTGGACGCTCCAACTTTTGTGGAATAGGCACCATGAACCTATCTACGTGTTTCATGAACCCGTGGTAA 1113 0.4528 MFSSTYDSNLFPNFPSSSYPILPFLIDPENDFASNTLLDDPLLVPFIPTTHDPPFPEETVANFAVADCTAMLEQDANTNYGSHYGGISNFLTQKPAIAKKDRHSKIHTSQGLRDRRVRLSSEIARKFFDLQDMLEFDKPSNTLEWLFTKSENAIKELAQSKHSGSISGGDKCSRDASVDSNNNKSLAGSGGDGSKGRKSKWAQKDDVCVQTKKESRERARARARERTCYKMCSNRRVQQDFDERCPATGNTQMLHQLRSSIQPEPEACARWVQPYNPYLIHSEAPRDGFDVIEESIMIKRNMKQSSMMASHHQNQSQNLVIPRDATFNNTVCPLLPYSSPDWDSNGAVSGRSNFCGIGTMNLSTCFMNPW 370
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01103 370 ProSiteProfiles TCP domain profile. 99 157 IPR017887 -
Spst10g01103 370 MobiDBLite consensus disorder prediction 174 189 - -
Spst10g01103 370 MobiDBLite consensus disorder prediction 159 216 - -
Spst10g01103 370 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 94 316 IPR005333 GO:0003700
Spst10g01103 370 MobiDBLite consensus disorder prediction 197 216 - -
Spst10g01103 370 Pfam TCP family transcription factor 98 233 IPR017887 -
Spst10g01103 370 ProSiteProfiles R domain profile. 213 230 IPR017888 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01103 Spst-Chr10 11791632 11792744 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01103 97 232 TCP Transcription Factor Family AT1G67260 41.772 7.79e-28 110
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF TCP Spst10g01103 TCP 1.6e-41 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01103 - - aprc:113871835 601.668
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Spst10g01103 10 11791632 11792744 Spst4g03072 4 70079636 70080581 PCT