Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01098 ATGCATTCAGAAAGCGGGGTTTCACCGAAGAAGGGATTGGAAGCTGAAGTTTTGAATTCAAAGGAAAACCTTAGCGGCAAAAACATGATATTTAGAACAGAAAAAATTGATTTGAGGAGCTTGGATGTGATGCTAGAAAAACACTTGACCAAGATTTTTACCAAAGGCATTGCTAAAAGGCATAAAGAGGCATGGGAGATTGATTTGGCCAAATTGGATTTACATTATTCTGTAGCTAAGGGAACCTATGGTACTGTCTACAAGGGTACCTATGACAGCAAAGATGTTGCAGTGAAAGTGTTGGACTGGGGTGAAGATGGTGTTGCCACCGCTAATGAAATTGCTTCTTTACGAGCATCATTTTGGCAGGAGGTTACTGTATGGCAAAAACTTGATCACCCAAATGTCACAAAATTTATTGGAGCTTCAGTGGCCACTTCAAATCTTATGATTCCCTTACCAACCTACGGTCAAAATTCTCTTCCTTCCAAGACGTGCTGTGTTATTGCTGAGTTTCTTCCCGGTGGAACCCTGAGACAATACTTGTTTAGAAATAGGCGGAACAAACTTCCATATAAGGTTGTGATTCAGCTGGCTTTGGACCTCTCTAGAGGTCTGAGTTATTTACATTCAAAGAAAATTGTTCACCGCGATGTAAAGCCTGATAATATGTTGTTAGACGCTAATCAAAATTTGAAAATAGCTGATTTTGGAGTTGCTCGTGTTGATTCTACCGATGAAAGTGAGATGACAAGTGAAACTGGAACCTATGGATATATGGCACCGGAGGTTTTAAGTGGCAAGCCTTACAACAGAAAATGTGATGTCTATAGTTTTGGCATTTGCTTGTGGGAAATTTATTGCCGTAAATTGCCGATTTCAAAGCTGAGCCTTGTTACTGTGTCATGTGCAGTAATGAATCAGCGGGATTTTGAAAATTCTTTAGGAACTTTTTCTGGTGGATTTGGAAGTCCAATTGAACTACCCAATGAAGAATGGTCCATCTTACCTTCAATTGGACTGGGTCTAGGTTCATTTGTTCAAATTACCGGGGGAGACTTTTTGAAGTCCATGAGTCCTTCCCTTTTTAGAAATGCCAAGAATTGTGGTTACCTCGTTACTCAGGCTTATAATCCAGTTGTTCTACCTGCAAAAATGGGTACTAATATATTGGATATACTGCTGCATGTGGCATCTGATGGAGTTGACGAGCTTTGTGATCATATCCATAAGTTATTGCCTGGAAAATCTATTGAGTATATTGCGTGGGAAGCCACAACCAACAAAGGGACTCCAGGAAGAGGTAATACGCCTTCCATTGGTGACGATGGTGGAGAAATTGGTGACGATGATCATGGATTGGTGCATTTACGACCTGAGATTCCAAGAAGTTGTCCAGGCGCCTTAGCAAACATCATAAGAAAATGCTGGGATGCAAAACCAGATAGGCGTCCAGAAATGCATGAGGTGGTGGAAATGTTGGAAGCGATTGACACTAGCCAAGGAGAGACAGACATTCGTGTTCGCACAGATTAA 1536 0.4108 MHSESGVSPKKGLEAEVLNSKENLSGKNMIFRTEKIDLRSLDVMLEKHLTKIFTKGIAKRHKEAWEIDLAKLDLHYSVAKGTYGTVYKGTYDSKDVAVKVLDWGEDGVATANEIASLRASFWQEVTVWQKLDHPNVTKFIGASVATSNLMIPLPTYGQNSLPSKTCCVIAEFLPGGTLRQYLFRNRRNKLPYKVVIQLALDLSRGLSYLHSKKIVHRDVKPDNMLLDANQNLKIADFGVARVDSTDESEMTSETGTYGYMAPEVLSGKPYNRKCDVYSFGICLWEIYCRKLPISKLSLVTVSCAVMNQRDFENSLGTFSGGFGSPIELPNEEWSILPSIGLGLGSFVQITGGDFLKSMSPSLFRNAKNCGYLVTQAYNPVVLPAKMGTNILDILLHVASDGVDELCDHIHKLLPGKSIEYIAWEATTNKGTPGRGNTPSIGDDGGEIGDDDHGLVHLRPEIPRSCPGALANIIRKCWDAKPDRRPEMHEVVEMLEAIDTSQGETDIRVRTD 511
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01098 511 CDD STKc_MAP3K-like 78 305 - -
Spst10g01098 511 SMART serkin_6 72 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01098 511 PANTHER SERINE/THREONINE-PROTEIN KINASE TNNI3K-RELATED 63 500 - -
Spst10g01098 511 Gene3D Transferase(Phosphotransferase) domain 1 161 337 - -
Spst10g01098 511 Pfam Protein kinase domain 80 295 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01098 511 ProSiteProfiles Protein kinase domain profile. 72 497 IPR000719 GO:0004672|GO:0005524|GO:0006468
Spst10g01098 511 Gene3D Phosphorylase Kinase; domain 1 61 153 - -
Spst10g01098 511 FunFam Kinase suppressor of Ras 1 61 155 - -
Spst10g01098 511 Gene3D Transferase(Phosphotransferase) domain 1 417 510 - -
Spst10g01098 511 ProSitePatterns Serine/Threonine protein kinases active-site signature. 214 226 IPR008271 GO:0004672|GO:0006468
Spst10g01098 511 SUPERFAMILY Protein kinase-like (PK-like) 57 496 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01098 Spst-Chr10 11740786 11746214 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01098 456 502 MAP Kinase Kinase Kinase AT3G22750 61.702 4.12e-15 75.1
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Spst10g01098 Pkinase 2.8e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01098 - K01968 gmx:100807899 501.516