Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Spst10g01083 ATGGGGAAGACAAGCAAATGGCTTAGAAACTTGTTGACAGGTAAGAAGGACAAAGAAAAGTTGAAGGAAAAATCTACAATCGACCTGAATTTTTCTTCGAATGGAACAGAAAACTCAGCCACTCCAACTTCCACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCCCCTACCGCAGCCACACCGACAGCAACTTCCAAGGAATTGAATTTTGTAGAACCAAATGTCAGTGATTCACAGACGGTGCAAGCTGACACTGATTTTCAGAACGAGCAAAGGAAGCATGCCATGGCTGTGGCTGCTGCGACTGCAGCAGCAGCTGATGCTGCAGTGGCTGCTGCTCAGGCCGTAGCTGCTGTGATCCGTTTGACTACTACTTCCAATGCAGCGCCTAAAAGCATTGAAGAAGCTGCAGCCATTAAAATCCAATCAGTCTTTCGGTCTCACTTGGCAAGGAAAGCATTGTGCGCTCTAAGAGGACTAGTGAAGTTGCAGGCACTGGTAAGGGGTCACTTGGTGAGAAAACAGGCCAAGGAAACACTGAGATGCATGCAGGCTTTGGTGACGGCACAAGCTAGAGCTCGTCTTCAGAGGATCCGAATGGGTTCAGAAGGAATTCCTACTCAACAACAAACAAAAGCCACAGAGGATGATTTTTTCAGGCATATATACAATGACATGGAGAGAGGCTTGGAAGACAACATCAAGATAGTTGAGATGGACGTTGGTGAAACAAAATATAACTCCAGAAGCAGAAGCAGCAGTGTATATCATCTTGGACATGAAGAACAATCTAACCATAGATTTTCCACAAATTATTCAACAAATGATTCTTACTCAAAGGAAGAAAACTACAAGGTATCACCCCCTCCATCAGCATTGACAGAGTTGAGTCCAAGAGCCTGCAGTGGACATTTTGAGGACTGTTTGAGCACAGCACAAAGCAGCCCTCAGTTCTACTCTGCTGTGTCAAGAACAGACAATTCAAAGCACCCTTTTTCTTTCCATAGGCCAGCTTATGCAGAATCTATGTGCTATGACCACCCTTTGTTTCCAAATTACATGGCTAACACTGAATCATCAAGGGCCAAAGTCAGATCACATAGTGCACCGAAACAAAGACCAGATTCATTTGAGAGGCAACCGAGCCGGCGAAGAGCTTCAGTTGAGGGAAGAAATGTCCCAAGGCCAATGAGGATGCAAAGGTCATCGTCACATGTGGGTGCTACTGCAAAAAACTATCAATATCCTTGGTCAATCAAGCTTGATAGATCTGCAGTTTCACTCAAAGACAGCGAGTGTGGCTCTACAAGTACAGTGCTCACTAACACTAATTATTGCAGATCTCTTGTTGCATTTGACCCACGTGGAGATAGGTACTGA 1395 0.448 MGKTSKWLRNLLTGKKDKEKLKEKSTIDLNFSSNGTENSATPTSTTPKEKKRWSFRRSSAPTAATPTATSKELNFVEPNVSDSQTVQADTDFQNEQRKHAMAVAAATAAAADAAVAAAQAVAAVIRLTTTSNAAPKSIEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKETLRCMQALVTAQARARLQRIRMGSEGIPTQQQTKATEDDFFRHIYNDMERGLEDNIKIVEMDVGETKYNSRSRSSSVYHLGHEEQSNHRFSTNYSTNDSYSKEENYKVSPPPSALTELSPRACSGHFEDCLSTAQSSPQFYSAVSRTDNSKHPFSFHRPAYAESMCYDHPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRASVEGRNVPRPMRMQRSSSHVGATAKNYQYPWSIKLDRSAVSLKDSECGSTSTVLTNTNYCRSLVAFDPRGDRY 464
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Spst10g01083 464 MobiDBLite consensus disorder prediction 264 296 - -
Spst10g01083 464 ProSiteProfiles IQ motif profile. 139 167 IPR000048 GO:0005515
Spst10g01083 464 MobiDBLite consensus disorder prediction 264 289 - -
Spst10g01083 464 Pfam Protein of unknown function (DUF4005) 321 396 IPR025064 -
Spst10g01083 464 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Spst10g01083 464 Gene3D - 138 191 - -
Spst10g01083 464 MobiDBLite consensus disorder prediction 369 396 - -
Spst10g01083 464 MobiDBLite consensus disorder prediction 10 26 - -
Spst10g01083 464 MobiDBLite consensus disorder prediction 365 411 - -
Spst10g01083 464 MobiDBLite consensus disorder prediction 27 48 - -
Spst10g01083 464 MobiDBLite consensus disorder prediction 1 68 - -
Spst10g01083 464 Pfam IQ calmodulin-binding motif 166 182 IPR000048 GO:0005515
Spst10g01083 464 Pfam IQ calmodulin-binding motif 141 159 IPR000048 GO:0005515
Spst10g01083 464 ProSiteProfiles IQ motif profile. 163 190 IPR000048 GO:0005515
Spst10g01083 464 SMART iq_5 138 160 IPR000048 GO:0005515
Spst10g01083 464 SMART iq_5 161 182 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Spst10g01083 Spst-Chr10 11586453 11588377 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Spst10g01083 1 454 IQD Protein Family AT4G14750 45.435 2.60e-99 304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Spst10g01083 - - gmx:100817667 712.99